diff --git a/docs/source/diagrams/mid_level/codeocean_pipeline_diagram.drawio b/docs/source/diagrams/mid_level/codeocean_pipeline_diagram.drawio index 2661df2..e0906e9 100644 --- a/docs/source/diagrams/mid_level/codeocean_pipeline_diagram.drawio +++ b/docs/source/diagrams/mid_level/codeocean_pipeline_diagram.drawio @@ -1,131 +1,322 @@ - + - + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - - - - + + + + + + + + - - - - + + + + + + + + - - + + + + + + + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + + + + + + + + + + - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + - - + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/docs/source/diagrams/mid_level/codeocean_pipeline_diagram.svg b/docs/source/diagrams/mid_level/codeocean_pipeline_diagram.svg index 357c6e8..04e9480 100644 --- a/docs/source/diagrams/mid_level/codeocean_pipeline_diagram.svg +++ b/docs/source/diagrams/mid_level/codeocean_pipeline_diagram.svg @@ -1,4 +1,4 @@ -
Modality A
Modality A
Modality B
Modality B
Modality B
Modality B
Processing pipeline Flow
Processing pipeline Flow
Storage Layer
Storage Layer
S3
S3
DocDB
DocDB
Legend
Legend
Modality data
Modality data
Raw metadata
Raw metadata
Derived metadata
Derived metadata
Raw data asset
Raw data asset
Derived data asset
Derived data asset
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Pipeline Modality 1
DocDB
S3: aind-open-data
Pipeline Modality 2
Pipeline Modality 3
NWB File
aind-data-schema metadata
aind-data-schema metadata:
  • procedures.json
  • subject.json
  • data_description.json
  • processing.json
  • data_description.json
  • acquisition.json
  • instrument.json
Raw Data
DocDB
S3: aind-open-data
DocDB
S3: aind-open-data
quality_control.json
Artifacts
data_description.json
NWB File with aind-data-schema metadata
Plots and metrics
NWB File
aind-data-schema metadata
Plots and metrics
DocDB
S3: aind-open-data
NWB File
aind-data-schema metadata
Plots and metrics
NWB File
aind-data-schema metadata
Plots and metrics
NWB File
aind-data-schema metadata
Plots and metrics
aind-data-schema metadata
Raw Data
modality1
modality2%3CmxGraphModel%3E%3Croot%3E%3CmxCell%20id%3D%220%22%2F%3E%3CmxCell%20id%3D%221%22%20parent%3D%220%22%2F%3E%3CmxCell%20id%3D%222%22%20parent%3D%221%22%20style%3D%22html%3D1%3BverticalLabelPosition%3Dbottom%3Balign%3Dcenter%3BlabelBackgroundColor%3D%23ffffff%3BverticalAlign%3Dtop%3BstrokeWidth%3D2%3BstrokeColor%3D%230080F0%3Bshadow%3D0%3Bdashed%3D0%3Bshape%3Dmxgraph.ios7.icons.folder%3B%22%20value%3D%22modality1%22%20vertex%3D%221%22%3E%3CmxGeometry%20height%3D%22130%22%20width%3D%22200%22%20x%3D%22-550%22%20y%3D%22-100%22%20as%3D%22geometry%22%2F%3E%3C%2FmxCell%3E%3C%2Froot%3E%3C%2FmxGraphModel%3E
modality3
metadata
metadata
metadata
aind-data-schema metadata
modality1
modality2%3CmxGraphModel%3E%3Croot%3E%3CmxCell%20id%3D%220%22%2F%3E%3CmxCell%20id%3D%221%22%20parent%3D%220%22%2F%3E%3CmxCell%20id%3D%222%22%20parent%3D%221%22%20style%3D%22html%3D1%3BverticalLabelPosition%3Dbottom%3Balign%3Dcenter%3BlabelBackgroundColor%3D%23ffffff%3BverticalAlign%3Dtop%3BstrokeWidth%3D2%3BstrokeColor%3D%230080F0%3Bshadow%3D0%3Bdashed%3D0%3Bshape%3Dmxgraph.ios7.icons.folder%3B%22%20value%3D%22modality1%22%20vertex%3D%221%22%3E%3CmxGeometry%20height%3D%22130%22%20width%3D%22200%22%20x%3D%22-550%22%20y%3D%22-100%22%20as%3D%22geometry%22%2F%3E%3C%2FmxCell%3E%3C%2Froot%3E%3C%2FmxGraphModel%3E
modality3
NWB File
processing.json
Tranform and Process
QC NWB FFile
Metadata Manager
+
+
+
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