From 7b94ae8475ad7b0e1eb4108f20c92f564fa7922f Mon Sep 17 00:00:00 2001 From: Cristianetaniguti Date: Fri, 1 May 2026 13:54:43 -0400 Subject: [PATCH 1/2] up readme --- README.md | 13 ++----------- 1 file changed, 2 insertions(+), 11 deletions(-) diff --git a/README.md b/README.md index c5346ad..23466f1 100644 --- a/README.md +++ b/README.md @@ -7,6 +7,8 @@ +# Breedverse + **Breedverse** is a modular R Shiny application developed by [Breeding Insight](https://www.breedinginsight.org) at University of Florida (UF/IFAS). It serves as a unified hub that lets users install and launch specialized breeding analysis tools — all from a single interface, with no command-line setup required. --- @@ -38,17 +40,6 @@ Breedverse::run_app() Modules are installed from within the app via the **Install Modules** page. Each module is sourced from GitHub and loaded dynamically. A restart of the app is required after installation to activate the new features. -### Qploidy — Ploidy Estimation - -> GitHub: [`Cristianetaniguti/Qploidy`](https://github.com/Cristianetaniguti/Qploidy) - -| Feature | Description | -|---|---| -| Standardization | Allele intensities / read counts standardization | -| Ploidy Estimation | Sample-level ploidy inference | -| Aneuploidy Detection | Identify chromosomal copy-number aberrations | - ---- ### BIGapp — Genotype Processing, Population Genomics, GWAS and GS From 3eded146aadf8624fb0fe9a05ca0b10fd88d7c95 Mon Sep 17 00:00:00 2001 From: Cristianetaniguti Date: Fri, 1 May 2026 13:55:35 -0400 Subject: [PATCH 2/2] fix --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 23466f1..981fa60 100644 --- a/README.md +++ b/README.md @@ -11,7 +11,7 @@ **Breedverse** is a modular R Shiny application developed by [Breeding Insight](https://www.breedinginsight.org) at University of Florida (UF/IFAS). It serves as a unified hub that lets users install and launch specialized breeding analysis tools — all from a single interface, with no command-line setup required. ---- + ## Overview