This directory contains the user-facing documentation for the native C++ implementation.
Current pages:
- Overview
- Installation
- Running Baysor
- Dataset Preview
- Segmentation-Free NCVs
- Input Data
- Prior Segmentation Inputs
- Outputs
- Output Files
- Xenium Workflow
- Configuration
- Examples
- Citation
This structure follows the useful parts of the old master documentation, but
it is intentionally narrower:
- it documents the currently implemented C++ CLI surface
- it treats Xenium Explorer support as a Xenium Ranger handoff workflow rather than direct bundle generation