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NAMESPACE
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executable file
·184 lines (183 loc) · 5.15 KB
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# Generated by roxygen2: do not edit by hand
export(CTutilsproject)
export(RECIST_COMPLETE)
export(RECIST_PARTIAL)
export(RECIST_PARTIAL_calculation)
export(RECIST_PROGRESSIVE)
export(RECIST_PROGRESSIVEabs_calculation)
export(RECIST_PROGRESSIVEperc_calculation)
export(add_dependency_to_fields)
export(all_files_exist)
export(calculate_BMI)
export(calculate_RECIST_response)
export(calculate_dose_modification)
export(calculate_missing_data)
export(calculate_mode)
export(calculate_number_of_instances)
export(check_all_files_exist)
export(check_extract_date)
export(convert_dates_to_EudraCT_age_categories)
export(create_SSR_structure)
export(create_dummy_dataset)
export(create_testresult_string)
export(do)
export(do_count)
export(do_count_comparison)
export(do_list_comparison)
export(do_list_extraction)
export(do_summary)
export(expand_dependency_locations_in_glossary)
export(expand_glossary)
export(extract_complex_dependencies)
export(extract_simple_dependencies)
export(find_mode)
export(fit_flextable_to_page)
export(get_random_dates)
export(initialise_RECIST_VALUES)
export(parse_MACRO_DSD_file)
export(parse_MACRO_DSD_file_for_glossary_and_dependencies)
export(plot_attendance_data)
export(plot_missing_data)
export(plot_missing_data_detailed)
export(print_M0M1_flextable)
export(print_data_queries_message)
export(print_error)
export(print_file_loading_info)
export(print_flextable)
export(print_labtests_flextable)
export(print_message)
export(print_signsandsyptoms_flextable)
export(print_warning)
export(read_EudraCT_vocabulary)
export(read_report_YAML)
export(record_data_query)
export(refactor_variable)
export(replace_func)
export(replace_infinite_numbers)
export(replace_missing_number)
export(replace_missing_string)
export(save_image)
export(subchunkify)
export(test_fn)
importFrom(RColorBrewer,brewer.pal)
importFrom(cowplot,plot_grid)
importFrom(dplyr,"%>%")
importFrom(dplyr,arrange)
importFrom(dplyr,bind_rows)
importFrom(dplyr,case_when)
importFrom(dplyr,ends_with)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,inner_join)
importFrom(dplyr,mutate)
importFrom(dplyr,mutate_all)
importFrom(dplyr,mutate_at)
importFrom(dplyr,mutate_if)
importFrom(dplyr,n)
importFrom(dplyr,na_if)
importFrom(dplyr,pull)
importFrom(dplyr,recode)
importFrom(dplyr,rename)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(dplyr,ungroup)
importFrom(dplyr,vars)
importFrom(flextable,add_header_row)
importFrom(flextable,align)
importFrom(flextable,autofit)
importFrom(flextable,bg)
importFrom(flextable,bold)
importFrom(flextable,border)
importFrom(flextable,border_remove)
importFrom(flextable,flextable)
importFrom(flextable,hline_bottom)
importFrom(flextable,hline_top)
importFrom(flextable,set_formatter_type)
importFrom(flextable,set_header_labels)
importFrom(flextable,valign)
importFrom(flextable,width)
importFrom(forcats,fct_drop)
importFrom(forcats,fct_expand)
importFrom(forcats,fct_relevel)
importFrom(forcats,fct_rev)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_grid)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_boxplot)
importFrom(ggplot2,geom_jitter)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_tile)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggplot_build)
importFrom(ggplot2,ggplot_gtable)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,scale_alpha_manual)
importFrom(ggplot2,scale_fill_distiller)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(graphics,plot)
importFrom(grid,grid.draw)
importFrom(grid,unit)
importFrom(knitr,kable)
importFrom(knitr,knit_expand)
importFrom(lubridate,as_date)
importFrom(lubridate,days)
importFrom(lubridate,interval)
importFrom(lubridate,is.Date)
importFrom(lubridate,today)
importFrom(lubridate,years)
importFrom(lubridate,ymd)
importFrom(officer,fp_border)
importFrom(purrr,discard)
importFrom(readxl,read_excel)
importFrom(rlang,":=")
importFrom(rlang,.data)
importFrom(rlang,as_label)
importFrom(rlang,quo)
importFrom(rlang,quo_name)
importFrom(rlang,sym)
importFrom(rlang,syms)
importFrom(stats,IQR)
importFrom(stats,median)
importFrom(stats,rnorm)
importFrom(stats,rpois)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(stringr,str_count)
importFrom(stringr,str_detect)
importFrom(stringr,str_extract)
importFrom(stringr,str_extract_all)
importFrom(stringr,str_length)
importFrom(stringr,str_remove)
importFrom(stringr,str_remove_all)
importFrom(stringr,str_replace)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_split)
importFrom(stringr,str_squish)
importFrom(stringr,str_trim)
importFrom(tibble,add_row)
importFrom(tibble,tibble)
importFrom(tibble,tribble)
importFrom(tidyr,complete)
importFrom(tidyr,fill)
importFrom(tidyr,gather)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,replace_na)
importFrom(tidyr,spread)
importFrom(utils,as.roman)
importFrom(utils,tail)
importFrom(xml2,read_xml)
importFrom(xml2,xml_children)
importFrom(xml2,xml_find_all)
importFrom(xml2,xml_name)
importFrom(xml2,xml_text)
importFrom(yaml,read_yaml)