diff --git a/.codeocean/app-panel.json b/.codeocean/app-panel.json index 50be09f..5e9d739 100644 --- a/.codeocean/app-panel.json +++ b/.codeocean/app-panel.json @@ -102,9 +102,13 @@ "name": "Add custom features to labels", "param_name": "add_features", "description": "Add custom_gene_list to default labels", - "type": "text", + "type": "list", "value_type": "string", - "default_value": "FALSE" + "default_value": "FALSE", + "extra_data": [ + "TRUE", + "FALSE" + ] }, { "id": "label_features_id", @@ -112,9 +116,13 @@ "name": "Label only custom features", "param_name": "label_features", "description": "Label ONLY features from custom_gene_list", - "type": "text", + "type": "list", "value_type": "string", - "default_value": "FALSE" + "default_value": "FALSE", + "extra_data": [ + "TRUE", + "FALSE" + ] }, { "id": "custom_gene_list_id", @@ -201,9 +209,13 @@ "name": "Displace specific labels", "param_name": "displace_feature_labels", "description": "Displace specific feature labels", - "type": "text", + "type": "list", "value_type": "string", - "default_value": "FALSE" + "default_value": "FALSE", + "extra_data": [ + "TRUE", + "FALSE" + ] }, { "id": "custom_gene_list_special_label_displacement_id", @@ -290,9 +302,13 @@ "name": "Flip volcano plot", "param_name": "flip_vplot", "description": "Flip fold change values", - "type": "text", + "type": "list", "value_type": "string", - "default_value": "FALSE" + "default_value": "FALSE", + "extra_data": [ + "TRUE", + "FALSE" + ] }, { "id": "use_default_x_axis_limit_id", @@ -300,9 +316,13 @@ "name": "Use default X-axis limit", "param_name": "use_default_x_axis_limit", "description": "Use default X-axis limit", - "type": "text", + "type": "list", "value_type": "string", - "default_value": "TRUE" + "default_value": "TRUE", + "extra_data": [ + "TRUE", + "FALSE" + ] }, { "id": "x_axis_limit_id", @@ -320,9 +340,13 @@ "name": "Use default Y-axis limit", "param_name": "use_default_y_axis_limit", "description": "Use default Y-axis limit", - "type": "text", + "type": "list", "value_type": "string", - "default_value": "TRUE" + "default_value": "TRUE", + "extra_data": [ + "TRUE", + "FALSE" + ] }, { "id": "y_axis_limit_id", @@ -390,9 +414,13 @@ "name": "Use default grid layout", "param_name": "use_default_grid_layout", "description": "Use default grid layout for multiple plots", - "type": "text", + "type": "list", "value_type": "string", - "default_value": "TRUE" + "default_value": "TRUE", + "extra_data": [ + "TRUE", + "FALSE" + ] }, { "id": "number_of_rows_in_grid_layout_id", diff --git a/CHANGELOG.md b/CHANGELOG.md index e477074..dfc6967 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,5 +1,9 @@ # Code Ocean capsule - MOSuite - Plot Volcano Summary +## Development version + +- Improved the Code Ocean parameter UI for the plot volcano summary capsule (#2, @phoman14). + ## v4.0 - The MOSuite package is now available in `code/MOSuite`. (#1) @@ -20,4 +24,4 @@ Save summarized dataframe to `results/moo/volcano_summary_data.csv`. Initial release - `0a5bebc` \ No newline at end of file + `0a5bebc`