setup.py

from setuptools import setup, find_packages


# Run setup
setup(
    name="kstar",
    version="1.1.0",
    author="Naegle Lab",
    author_email="kmn4mj@virginia.edu",
    url="https://github.com/NaegleLab/KSTAR",
    install_requires=['pandas>=2.1', 'numpy>=1.26', 'scipy>=1.11', 'matplotlib>=3.8', 'seaborn>=0.13', 'requests', 'fpdf2>=2.5', 'tqdm'],
    keywords=['kinase', 'phosphoproteomics', 'bioinformatics', 'proteomics', 'kinase activity inference'],
    license='GNU General Public License v3',
    description='KSTAR: Kinase-Substrate Transfer to Activity Relationships',
    long_description="""KSTAR is an open-source software for estimating kinase activities from phosphoproteomic data. KSTAR implements statistical and graph-theoretic approaches to produce a robust activity score that increases with increasing evidence from a kinase's network.""",
    project_urls = {
        'Homepage': 'https://github.com/NaegleLab/KSTAR',
        'Documentation': 'https://naeglelab.github.io/KSTAR/'},
    classifiers=[
        "Programming Language :: Python :: 3",
        "Intended Audience :: Science/Research",
        "Operating System :: OS Independent",
    ],
    packages=find_packages(),
    include_package_data = True,
    python_requires=">=3.9",
    zip_safe = False
)