-
Notifications
You must be signed in to change notification settings - Fork 1
Expand file tree
/
Copy pathjobs.html
More file actions
490 lines (354 loc) · 21.6 KB
/
Copy pathjobs.html
File metadata and controls
490 lines (354 loc) · 21.6 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<!-- Force latest available IE rendering engine and Chrome Frame (if installed) -->
<meta http-equiv="X-UA-Compatible" content="IE=edge,chrome=1">
<!-- Document Title & Description -->
<title>The Nemati Lab | Jobs at the Nemati Lab</title>
<meta name="description" content="Shamim Nemati is the principal investigator of the Nemati Lab at the UC San Diego Health.">
<meta name="keywords" content="Physiological Signal Processing, Machine Learning, Physiological Control, Wearables, Artificial Intelligence, Deep Learning, Reinforcement Learning, ">
<!-- rss feed autodiscovery link -->
<link rel="alternate" type="application/rss+xml" title="Nemati Lab News" href="feed.xml" />
<!-- Mobile Screen Resizing -->
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<!-- Favicon -->
<link rel="shortcut icon" href="assets/images/icons/favicon.ico">
<link rel="icon" href="assets/images/icons/favicon-32.png" sizes="32x32">
<!-- For iPad with high-resolution Retina display running iOS ≥ 7: -->
<link rel="apple-touch-icon-precomposed" href="assets/images/icons/favicon-32.png">
<!-- For iPad with high-resolution Retina display running iOS ≤ 6: -->
<link rel="apple-touch-icon-precomposed" sizes="144x144" href="assets/images/icons/favicon-32.png">
<!-- For iPhone with high-resolution Retina display running iOS ≥ 7: -->
<link rel="apple-touch-icon-precomposed" sizes="120x120" href="assets/images/icons/favicon-32.png">
<!-- For iPhone with high-resolution Retina display running iOS ≤ 6: -->
<link rel="apple-touch-icon-precomposed" sizes="114x114" href="assets/images/icons/favicon-32.png">
<!-- For first- and second-generation iPad: -->
<link rel="apple-touch-icon-precomposed" sizes="72x72" href="assets/images/icons/favicon-32.png">
<!-- For non-Retina iPhone, iPod Touch, and Android 2.1+ devices: -->
<link rel="apple-touch-icon-precomposed" href="assets/images/icons/favicon-32.png">
<!-- Microsoft icon -->
<meta name="msapplication-TileColor" content="#6cc4fc"/>
<meta name="msapplication-TileImage" content="assets/images/icons/favicon-32.png"/>
<link rel="stylesheet" href="assets/css/style.css" type="text/css">
<link href='http://fonts.googleapis.com/css?family=Open+Sans:300italic,400italic,300,400' rel='stylesheet' type='text/css'>
<!-- HTML5 Shim for IE 6-8 -->
<!--[if lt IE 9]>
<script src="http://html5shiv.googlecode.com/svn/trunk/html5.js"></script>
<![endif]-->
</head>
<body class="">
<!-- Old Browser Warning -->
<!--[if lt IE 8]>
<section class="container">
Did you know that your web browser is a bit old? Some of the content on this site might not work right as a result. <a href="http://whatbrowser.org">Upgrade your browser</a> for a faster, better, and safer web experience.
</section>
<![endif]-->
<header id="header-mobile" class="hide-on-desktop">
<h4 ><a href="index.html">The Nemati Lab at UC San Diego</a></h4>
<nav>
<ul class="nav-collapse">
<li><a class="icon-users" href="people.html">people</a></li>
<li> <a class="icon-stethoscope" href="projects.html">projects</a></li>
<li><a class="icon-edit" href="publications.html">publications</a></li>
<li><a class="icon-doc" href="news.html">news</a></li>
<li> <a class="icon-phone" href="contact.html">contact us</a> </li>
</ul>
</nav>
<a class="hide-on-desktop icon-angle-circled-down" id="toggle" class="closed">Menu</a>
</header>
<header id="header-desktop" class="hide-on-mobile">
<nav>
<ul class="horizontal">
<li id="logo-thing"> <a id="logo" title="The Nemati Lab at UC San Diego" href="index.html"></a> </li>
<li> <a class="icon-phone" href="index.html#" id="contact-button">contact us</a> </li>
<li> <a class="icon-doc" href="news.html">news</a></li>
<li> <a class="icon-edit" href="publications.html">publications</a> </li>
<li> <a class="icon-stethoscope" href="projects.html">projects</a></li>
<li> <a class="icon-users" href="people.html">people</a> </li>
</ul>
</header>
<div class="contact-row" style="display:none">
<div class="row">
<!-- JavaScript -->
<div class="two-thirds">
<h1><span style="color: black;"> Contact us </span></h1>
<h4>Fill in this form...</h4>
<form id="form1" name="form1" class="contact" accept-charset="UTF-8" autocomplete="off" enctype="multipart/form-data" method="post" novalidate
action="https://thewalllab.wufoo.com/forms/zngape20d4u6hw/#public">
<div class="">
<div class="half">
<!--
<label class="desc" id="title12" for="Field12">
Name
</label>
-->
<div>
<input placeholder="Your Name" id="Field7" name="Field7" type="text" class="field text medium" value="" maxlength="255" tabindex="1" onkeyup="" />
</div>
<!--
<label class="desc" id="title3" for="Field3">
Your phone
</label>
-->
<div>
<input placeholder="Your Phone" id="Field9" class="field text medium" name="Field9" tabindex="2" type="tel" maxlength="255" value="" />
</div>
<!--
<label class="desc" id="title19" for="Field19">
Your email<br />
</label>
-->
<input placeholder="Your Email" id="Field4" name="Field4" type="email" spellcheck="false" class="field text medium" value="" maxlength="255" tabindex="3" />
</div>
<div class="half">
<!--
<label class="desc" id="title20" for="Field20">
Your Message<br />
</label>
-->
<textarea id="Field5"
placeholder="Your message"
name="Field5"
class="field textarea medium"
spellcheck="true"
rows="10" cols="50"
tabindex="4"
onkeyup=""
></textarea>
</div>
</div>
<input id="saveForm" name="saveForm" class="btTxt submit"
type="submit" value="Send" />
<div class="hide">
<label for="comment">Do Not Fill This Out</label>
<textarea name="comment" id="comment" rows="1" cols="1"></textarea>
<input type="hidden" id="idstamp" name="idstamp" value="u+JJUhS8ZA08Pc3aRDc2idLZdvdGfwf+XjaB6EWDobI=" />
</div>
</div>
</form>
<div class="one-third">
<a class="close violet" href="jobs.html#">x</a>
</div>
</div>
</div>
<div class="row main">
<main>
<p></p><p></p> <p></p><p></p>
<section>
<!--<h1>Jobs at the Nemati Lab</h1>-->
<h1>Employment Opportunities</h1>
<hr>
<p>We're looking to hire these positions:</p>
<ul>
<li><a href="jobs.html#lead-mobile">Lead Mobile Engineer (Machine Learning / Computer Vision Focus)</a></li>
<li><a href="jobs.html#lead-machine-learning">Lead Machine Learning / Computer Vision Engineer</a></li>
<li><a href="jobs.html#senior-bioinformatician">Bioinformatics Specialist</a><br></li>
</ul>
<h2>* <a href="jobs.html#big-data-specialist">Big Data Specialist</a></h2>
<p><a class="anchor" name="lead-mobile"></a></p>
<h3>Lead Mobile Engineer (Machine Learning / Computer Vision Focus)</h3>
<p>The laboratory of Shamim Nemati at Emory School of Medicine is looking for a driven mobile engineer to head up mobile application development in our technology team on the <a href="projects/autism-therapy-on-glass.html">Autism Glass Project.</a> </p>
<h4>Primary Purpose</h4>
<p>You should have a strong background in computer science, systems, and mobile application development. You don’t rely on a UI design contractor to get you a PSD of what the app is supposed to look like. You love user interfaces and user experience design. You can design good architectures where it’s necessary, but you’re enough of a hacker to get the job done. Ideally, you’ve also developed some low-level software tools and understand what it means to do heavy computation in C++ on a low-powered mobile device. Finally, you’re tremendously excited about building an application that helps kids with Autism recognize social cues.</p>
<p>Ideal candidates for this position have built several Android applications and at least one iOS app, are familiar with low-level tools like the NDK.</p>
<h4>Required Experience:</h4>
<ul>
<li> Mobile development experience on iOS and Android in Objective-C, Java, and using the Android NDK</li>
<li> Excited to develop on new platforms</li>
<li> Understanding of networking protocols</li>
<li> Track record of shipping and scaling products in a non-research setting</li>
<li> Excellent engineering communication skills</li>
<li> Comfortable in a Unix environment with common developer tools</li>
</ul>
<h4>Desired:</h4>
<ul>
<li> GPU Programming experience</li>
<li> At least one scripting language and a basic understanding of processing large datasets</li>
<li> Basic knowledge of image processing, machine learning, and computer vision and familiarity with OpenCV</li>
</ul>
<p>To apply, please contact nhaber AT Emory DOT edu</p>
<hr>
<p><a class="anchor" name="lead-machine-learning"></a></p>
<h3>Lead Machine Learning / Computer Vision Engineer</h3>
<p>The laboratory of Dr. Shamim Nemati at Emory School of Medicine is looking for a driven machine learning and computer vision engineer to co-lead our core technology team on the <a href="projects/autism-therapy-on-glass.html">Autism Glass Project.</a> </p>
<h4>Primary Purpose</h4>
<p>You should have a strong background in applied mathematics, optimization, machine learning, and software development. We are working on research problems on a product development timeline, so you should be enough of a scientist to be able to understand and implement your average ICCV paper, and enough of a hacker to be able to immerse yourself in challenging tasks without much guidance or background and write production-ready code. Ideal candidates for this position have a PhD or MS in a field related to artificial intelligence as well as publications at conferences such as ICCV or NIPS. </p>
<h4>Required Experience:</h4>
<ul>
<li>Linear Algebra</li>
<li>Machine Learning</li>
<li>Programming experience on a large-scale project in C/C++</li>
<li>Computer Vision and OpenCV</li>
<li>Comfortable in a Unix environment with common developer tools</li>
</ul>
<h4>Desired:</h4>
<ul>
<li> Knowledge of Objective-C, iOS, and Android development</li>
<li> GPU Programming experience</li>
<li> At least one scripting language and a basic understanding of processing large datasets</li>
<li> Previous work in face tracking, face recognition, or expression recognition</li>
<li> Image processing background</li>
<li> Deep learning experience and familiarity with Caffe</li>
</ul>
<p>To apply, please contact nhaber AT Emory DOT edu</p>
<hr>
<p><a class="anchor" name="senior-bioinformatician"></a></p>
<h3>Bioinformatics Specialist</h3>
<p>The laboratory of Dr. Shamim Nemati at Emory School of Medicine is seeking highly motivated staff to develop and study novel approaches in data-driven biomedical research to discover new biomarkers, therapeutics, and to revolutionize health and health-care.</p>
<h4>Primary Purpose(s)</h4>
<p>Employee will conduct research and development in biomedical informatics and biostatistics, by architecting, developing, maintaining, and documenting a bioinformatics software infrastructure that integrates disparate forms of clinical and genomic data and offers other evolving capabilities to support research activities. Responsibilities for this position include,</p>
<p>(1) to develop and implement novel computational techniques in software that can reanalyze public repositories of clinical and genomic data,
(2) to design, implement, and support novel software tools that allow for complex, biologically-driven queries across multiple types of data,
(3) to manage third-party programming services in the development, documentation, and release of public bioinformatics resources,
(4) to propose, research, and develop novel bioinformatics methods and techniques to support new research, and
(5) to consult with collaborating faculty and staff with regards to bioinformatics aspects of shared research endeavors. </p>
<p>This employee will be responsible for writing manuscripts and publishing novel bioinformatics findings and developments in appropriate professional journals and will be required to present aspects of bioinformatics work at conferences and workshops around the US and world.</p>
<h4>Desired Skills and Experience</h4>
<h5>Required:</h5>
<p>This position requires expert proficiency and strong experience in a number of technical and bioinformatics aspects. Previous scientific publications in biomedicine and/or bioinformatics or biostatistics are a must. Strong experience and proficiency with</p>
<ul>
<li>compiled (e.g. C, C++, Java) and interpreted (e.g. PERL, Python, Ruby) programming languages,</li>
<li>statistical or engineering software (preferably R),</li>
<li>relational database management systems such as MySQL or Oracle,</li>
<li>structured data file format approaches such as XML or RDF,</li>
<li>web-server and web-services technologies and tools, such as PHP, JSP, or SOAP</li>
<li>the use of common bioinformatics tools and algorithms, such as BLAST, SAMR, NCBI and EBI eUtils, and</li>
<li>knowledge mining technologies such as Weka, and</li>
<li>the use of high-performance computing (HPC) management software such as Sun Grid Engine (SGE), PVM, or MPI or cloud-based computing (e.g. Amazon, or others), is required. </li>
</ul>
<p>Additionally, the employee is required to have experience in a number of bioinformatics domains including,</p>
<ul>
<li>genomic sequence analysis,</li>
<li>gene expression analysis,</li>
<li>comparative genomics and phylogenetics, and</li>
<li>analysis of genetic variation within organisms and across populations. </li>
</ul>
<p>Strong experience in data mining and statistics is a must. The candidate must have a high level of integrity and excellent judgment concerning privacy issues. Prior experience in writing and publishing scientific manuscripts is a must. Prior background in autism genetics or similar complex genetic disease is a plus. Strong written and oral communication skills in English are essential. </p>
<h4>Education:</h4>
<h5>Required:</h5>
<p>Four-year college degree
Field of Study: Computer Science, Bioinformatics, Computational Biology, Biomedical Computation, Biomedical Informatics or related</p>
<h5>Desired:</h5>
<p>Advanced degree (e.g., MA, MS, JD, PhD)
Field of Study: Computer Science, Bioinformatics, Computational Biology, Biomedical Computation, Biomedical Informatics or related</p>
<h4>Related experience:</h4>
<h5>Required:</h5>
<p>2 years</p>
<h5>Desired:</h5>
<p>4 + years</p>
<p>To apply, please send your CV, a brief statement of research interests, and contact information for three references.
<strong>Please contact <span id="email-link">sta<span style="display:none">gnstane</span>ngen@Emory.edu</span></strong> </p>
<hr>
<p><a class="anchor" name="big-data-specialist"></a></p>
<h3>Big Data Specialist</h3>
<p>The Nemati Lab in the Division of Systems Medicine, Department of Pediatrics, has an immediate opening for Big Data Specialist. This person will be a key member of the iHART: Hartwell Autism Informatics Research and Technology Initiative. This is an exciting opportunity to join a new team of informatics and data experts in their venture to translate autism research data into tangible clinical benefit for people faced with the challenges of autism. </p>
<p>The Big Data Specialist will be responsible for collecting, managing and analyzing petabytes of biological (genomic, proteomic, imaging, phenotypic and more) data relevant to understanding autism. The goal of iHART is to the empower the global autism community with central, open access to more data on autism than ever before, will enable complex queries on these data that propel major discoveries, and will lead the way towards clinical translation of various biomarkers for early detection, treatment, and cure of individuals with autism.</p>
<p>Duties include:</p>
<ul>
<li>Lead and own organization-wide data initiatives (e.g. models, frameworks, platforms, dashboards).</li>
<li>Identify, leverage and partner with external firms.</li>
<li>Prioritize and extract data from a variety of sources such as notes, survey results, medical reports, and laboratory data, and maintain its accuracy and completeness.</li>
<li>Determine additional data collection and reporting requirements. Design and customize reports based upon data in the database. Oversee and monitor regulatory compliance for utilization of the data.</li>
<li>Use system reports and analyses to identify potentially problematic data, make corrections, and eliminate root cause for data problems or justify solutions to be implemented by others.</li>
<li>Create complex charts and databases, perform statistical analyses, and develop graphs and tables for publication and presentation.</li>
<li>Serve as a resource for non-routine inquiries such as requests for statistics or surveys.</li>
<li>Test prototype software and participate in approval and release process for new software.</li>
<li>Provide documentation based on audit and reporting criteria to investigators and research staff.</li>
<li>Supervise, coach and mentor a high- performing team of analysts.</li>
<li>Contribute towards operations in software development</li>
</ul>
<p>Qualifications:</p>
<ul>
<li>Four-year college degree, or equivalent education and experience. Degree in: bioinformatics, computer science, systems biology, or related</li>
<li>Experience in computational biology, bioinformatics, systems biology, or related</li>
<li>Have handled gene expression data</li>
<li>Strong written and analytical skills</li>
<li>Designed, monitored and managed scalable user interface applications </li>
<li>Experience with continuous integration, log collection and analysis, builds and performance monitoring/tuning of infrastructure</li>
<li>Confident writing scripts in ruby/bash/groovy/python (at least two of those)</li>
<li>Experience in cloud platforms, AWS, MySQL, and Oracle</li>
<li>Ability to work independently, with minimal supervision</li>
</ul>
<p><strong>Please contact <span id="email-link">sta<span style="display:none">gnstane</span>ngen@Emory.edu</span> with your CV/resume.</strong> </p>
</section>
</main>
<aside>
<section>
<p></p>
<p></p>
<h4>Recent News</h4>
<h5><a href="2016/04/14/congratulations-catalin!/index.html">Congratulations Catalin!</a></h5>
<h6>April 14, 2016</h6>
<h5><a href="2016/04/13/kqed-science-interviews-wall-lab-on-autism-glass-project/index.html">Kqed Science Interviews Nemati Lab On Autism Glass Project</a></h5>
<h6>April 13, 2016</h6>
<h5><a href="2016/04/13/congratulations-to-autism-google-glass-team-for-best-poster-award/index.html">Congratulations To Autism Google Glass Team For Best Poster Award</a></h5>
<h6>April 13, 2016</h6>
<h5><a href="2016/03/07/dennis-wall-talks-big-data-approaches-to-autism-research/index.html">Shamim Nemati Talks Big Data Approaches To Autism Research</a></h5>
<h6>March 07, 2016</h6>
<h5><a href="2015/06/17/congratulations-to-Dr.-Wall-and-his-team!/index.html">Congratulations To Dr. Wall And His Team!</a></h5>
<h6>June 17, 2015</h6>
<p>
<a class="green" href="news.html">see all news »</a>
</p>
<div class="social">
<i class="icon-twitter"></i><a href="http://twitter.com/TheWallLab">follow on twitter</a>
<i class="icon-facebook-squared"></i><a href="http://facebook.com/TheWallLab">follow on facebook</a>
</div>
<div id="projects-menu">
<a href="projects.html"><h3>Projects</h3></a>
<ul>
<li><a href="projects/bigpicture.html">Big Picture</a> </li>
<li><a href="projects/sysmed.html">SysMed</a> </li>
<li><a href="projects/6000exomes.html">NGS Large-Scale Variant Detection in Autism</a> </li>
<li><a href="projects/cosmos.html">Cosmos</a> </li>
<li><a href="projects/neuroinformatics.html">Neuroinformatics</a> </li>
<li><a href="projects/genotator.html">Genotator</a> </li>
<li><a href="projects/machinelearning.html">Machine Learning</a> </li>
<li><a href="projects/dmcsurvey.html">DMC Survey</a> </li>
<li><a href="projects/homevideoproject.html">Home Video Project</a> </li>
<li><a href="projects/connectome.html">Connectome</a> </li>
<li><a href="projects/route66.html">Route 66 to Autism</a> </li>
<li><a href="projects/genehawk.html">Genehawk</a> </li>
<li><a href="projects/roundup.html">Roundup</a> </li>
</ul>
</div>
</section>
</aside>
</div>
<footer>
<hr>
<div class="row">
<div >
<!-- <h3>links</h3>-->
<span > <a href="about.html" style="color: #0088CC; font-size:14px;">About the Nemati Lab </a> </span>
<span > <a href="directions.html" style="color: #0088CC; font-size:14px;"> <span style="color: #CD5C5C"> | </span> Directions </a></span>
<span > <a href="openings.html" style="color: #0088CC; font-size:14px;"> <span style="color: #CD5C5C"> | </span> Lab Openings</a></span>
<span > <a target="_blank" href="http://nematilab.info/bmijc/" style="color: #0088CC; font-size:14px;vv"> <span style="color: #CD5C5C"> | </span> Journal Club</a></span>
</div>
</div>
</footer>
<footer class="subfooter">
<div class="row">
<p> © UC San Diego, La Jolla, CA 92093-0881 </p>
</div>
</footer>
<script src="assets/js/jquery.min.js"></script>
<script src="assets/js/jquery.flexslider-min.js"></script>
<script src="assets/js/jquery.countdown.min.js"></script>
<script src="assets/js/concealemail.js"></script>
<script src="assets/js/responsive-nav.min.js"></script>
<script>(function($) {
$(document).ready( function() {
$('.e').emailLink();
} );
})(jQuery);
</script>
<script>
var navigation = responsiveNav(".nav-collapse", {
customToggle: "#toggle"
});
</script>
<script src="assets/js/main.js"></script>
</body>
</html>