Package fails to install

[ite248]

Consol output:

'> remotes::install_github("RS-eco/traitdata", build_vignettes = T, force=T)
Downloading GitHub repo RS-eco/traitdata@HEAD
── R CMD build ─────────────────────────────────────────────────────────────────────
✔ checking for file ‘/private/var/folders/wn/4525434s1xxgzc623cqwtyjr0000gn/T/RtmprwROqA/remotes101fa6089c8bd/RS-eco-traitdata-5560f5a/DESCRIPTION’ ...
─ preparing ‘traitdata’:
✔ checking DESCRIPTION meta-information
─ installing the package to build vignettes
E creating vignettes (46.8s)
--- re-building ‘access-data.Rmd’ using rmarkdown
--- finished re-building ‘access-data.Rmd’

--- re-building ‘data_info.Rmd’ using rmarkdown
--- finished re-building ‘data_info.Rmd’

--- re-building ‘island-birds.Rmd’ using rmarkdown
--- finished re-building ‘island-birds.Rmd’

--- re-building ‘migbehav_birds.Rmd’ using rmarkdown
--- finished re-building ‘migbehav_birds.Rmd’

--- re-building ‘morpho-indices.Rmd’ using rmarkdown

Quitting from lines 54-68 [unnamed-chunk-2] (morpho-indices.Rmd)
Error: processing vignette 'morpho-indices.Rmd' failed with diagnostics:
there is no package called 'patchwork'
--- failed re-building ‘morpho-indices.Rmd’

--- re-building ‘pantheria.Rmd’ using rmarkdown
--- finished re-building ‘pantheria.Rmd’

--- re-building ‘passerines.Rmd’ using rmarkdown
--- finished re-building ‘passerines.Rmd’

--- re-building ‘trait_glossary.Rmd’ using rmarkdown
--- finished re-building ‘trait_glossary.Rmd’

SUMMARY: processing the following file failed:
‘morpho-indices.Rmd’

Error: Vignette re-building failed.
Execution halted
Error: Failed to install 'traitdata' from GitHub:
! System command 'R' failed'

[RS-eco]

Seems like you are missing the patchwork package for an installation with vignettes. So either install the patchwork package or try setting build_vignettes=FALSE when running the install_github function. Best, RS-eco

…

On 6 September 2024 01:23:41 CEST, ite248 ***@***.***> wrote: Consol output: '> remotes::install_github("RS-eco/traitdata", build_vignettes = T, force=T) Downloading GitHub repo ***@***.*** ── R CMD build ───────────────────────────────────────────────────────────────────── ✔ checking for file ‘/private/var/folders/wn/4525434s1xxgzc623cqwtyjr0000gn/T/RtmprwROqA/remotes101fa6089c8bd/RS-eco-traitdata-5560f5a/DESCRIPTION’ ... ─ preparing ‘traitdata’: ✔ checking DESCRIPTION meta-information ─ installing the package to build vignettes E creating vignettes (46.8s) --- re-building ‘access-data.Rmd’ using rmarkdown --- finished re-building ‘access-data.Rmd’ --- re-building ‘data_info.Rmd’ using rmarkdown --- finished re-building ‘data_info.Rmd’ --- re-building ‘island-birds.Rmd’ using rmarkdown --- finished re-building ‘island-birds.Rmd’ --- re-building ‘migbehav_birds.Rmd’ using rmarkdown --- finished re-building ‘migbehav_birds.Rmd’ --- re-building ‘morpho-indices.Rmd’ using rmarkdown Quitting from lines 54-68 [unnamed-chunk-2] (morpho-indices.Rmd) Error: processing vignette 'morpho-indices.Rmd' failed with diagnostics: there is no package called 'patchwork' --- failed re-building ‘morpho-indices.Rmd’ --- re-building ‘pantheria.Rmd’ using rmarkdown --- finished re-building ‘pantheria.Rmd’ --- re-building ‘passerines.Rmd’ using rmarkdown --- finished re-building ‘passerines.Rmd’ --- re-building ‘trait_glossary.Rmd’ using rmarkdown --- finished re-building ‘trait_glossary.Rmd’ SUMMARY: processing the following file failed: ‘morpho-indices.Rmd’ Error: Vignette re-building failed. Execution halted Error: Failed to install 'traitdata' from GitHub: ! System command 'R' failed' -- Reply to this email directly or view it on GitHub: #3 You are receiving this because you are subscribed to this thread. Message ID: ***@***.***>

[ite248]

Ah that worked. Thank you!