Skip to content

Biofilter may be dropping intergenic variations (noncoding) #17

@van-truong

Description

@van-truong

This is a combination of issues that Rasika and Nikki separately observed. We need to check how much Biofilter is mapping SNPs, genes, ensembl IDs, and other info for intergenic regions

In scenarios where there's multiple gene variations, is Biofilter dropping intergenic variations (noncoding) and only showing the user the coding variation? RS# IDs, LOC locus IDs, genomic positions in noncoding regions, etc

Will add more to this issue thread soon.

Metadata

Metadata

Assignees

No one assigned

    Labels

    2.4.4bugSomething isn't working

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions