python-package.yml

name: Python Package using Conda

on: 
  push: 
    branches:
      - master
  pull_request:
    branches: [master]
    types: [synchronize, opened, reopened, ready_for_review]

jobs:
  build-and-test:
    name: Test on (${{ matrix.os }})
    runs-on: ${{ matrix.os }}
    strategy:
      fail-fast: false
      matrix:
        os: ["ubuntu-latest", "macos-latest", "windows-latest"]
    steps:
      - uses: actions/checkout@v2
      - uses: s-weigand/setup-conda@v1
        with:
          python-version: 3.8
      - name: Which python
        run: |
          conda --version
          which python
      - name: Install dependencies
        run: |
          conda install -c conda-forge datalad
          conda install -c conda-forge ruamel.yaml
          conda install flake8
          conda install pytest
          pip install -r requirements-dev.txt
          pip install -r requirements.txt
          pip install h5py==2.10
          pip install -e .[full]
          # needed for correct operation of git/git-annex/DataLad
          git config --global user.email "CI@example.com"
          git config --global user.name "CI Almighty"
      - name: Lint with flake8
        run: |
          # stop the build if there are Python syntax errors or undefined names
          flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
          # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
          flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
      - name: Test with pytest and build coverage report
        run: |
          pytest