Yaml file not working in WSL #12
Description
Hello, I was trying to create the SCAPTURE env with conda as per instructions, however the yaml file downloaded caused a lengthy error message from conda:
`# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda/exceptions.py", line 1129, in __call__
return func(*args, **kwargs)
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/cli/main.py", line 80, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda/notices/core.py", line 72, in wrapper
return_value = func(*args, **kwargs)
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/cli/main_create.py", line 103, in execute
spec = specs.detect(name=name, filename=get_filename(args.file), directory=os.getcwd())
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/specs/__init__.py", line 47, in detect
if spec.can_handle():
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/specs/yaml_file.py", line 19, in can_handle
self._environment = env.from_file(self.filename)
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/env.py", line 169, in from_file
return from_yaml(yamlstr, filename=filename)
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda_env/env.py", line 143, in from_yaml
data = yaml_safe_load(yamlstr)
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/conda/common/serialize.py", line 50, in yaml_safe_load
return yaml.safe_load(string, version="1.2")
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/main.py", line 980, in safe_load
return load(stream, SafeLoader, version)
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/main.py", line 935, in load
return loader._constructor.get_single_data()
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/constructor.py", line 109, in get_single_data
node = self.composer.get_single_node()
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/composer.py", line 78, in get_single_node
document = self.compose_document()
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/composer.py", line 104, in compose_document
self.parser.get_event()
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/parser.py", line 163, in get_event
self.current_event = self.state()
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/parser.py", line 239, in parse_document_end
token = self.scanner.peek_token()
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/scanner.py", line 182, in peek_token
self.fetch_more_tokens()
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/scanner.py", line 282, in fetch_more_tokens
return self.fetch_value()
File "/home/rbarb/anaconda3/lib/python3.9/site-packages/ruamel_yaml/scanner.py", line 651, in fetch_value
raise ScannerError(
ruamel_yaml.scanner.ScannerError: mapping values are not allowed here
in "<unicode string>", line 195, column 75:
... age-responsive" style="word-wrap: break-word;">
^ (line: 195)
$ /home/rbarb/anaconda3/bin/conda-env create -f SCAPTURE_env.yaml
environment variables:
CIO_TEST=
CONDA_AUTO_UPDATE_CONDA=false
CONDA_DEFAULT_ENV=base
CONDA_EXE=/home/rbarb/anaconda3/bin/conda
CONDA_PREFIX=/home/rbarb/anaconda3
CONDA_PROMPT_MODIFIER=(base)
CONDA_PYTHON_EXE=/home/rbarb/anaconda3/bin/python
CONDA_ROOT=/home/rbarb/anaconda3
CONDA_SHLVL=1
CURL_CA_BUNDLE=
PATH=/home/rbarb/.local/bin:/home/rbarb/.local/bin:/home/rbarb/anaconda3/bi
n:/home/rbarb/anaconda3/condabin:/home/rbarb/.local/bin:/usr/local/sbi
n:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/g
ames:/usr/lib/wsl/lib:/mnt/c/Program Files (x86)/Common Files/Oracle/J
ava/javapath:/mnt/c/windows/system32:/mnt/c/windows:/mnt/c/windows/Sys
tem32/Wbem:/mnt/c/windows/System32/WindowsPowerShell/v1.0:/mnt/c/windo
ws/System32/OpenSSH:/mnt/c/Program Files (x86)/NVIDIA Corporation/Phys
X/Common:/mnt/c/WINDOWS/system32:/mnt/c/WINDOWS:/mnt/c/WINDOWS/System3
2/Wbem:/mnt/c/WINDOWS/System32/WindowsPowerShell/v1.0:/mnt/c/WINDOWS/S
ystem32/OpenSSH:/mnt/c/Program Files/PuTTY:/mnt/c/Program Files/NVIDIA
Corporation/NVIDIA NvDLISR:/mnt/c/WINDOWS/system32:/mnt/c/WINDOWS:/mnt
/c/WINDOWS/System32/Wbem:/mnt/c/WINDOWS/System32/WindowsPowerShell/v1.
0:/mnt/c/WINDOWS/System32/OpenSSH:/mnt/c/Users/RBarbieri/AppData/Local
/Microsoft/WindowsApps:/snap/bin
REQUESTS_CA_BUNDLE=
SSL_CERT_FILE=
active environment : base
active env location : /home/rbarb/anaconda3
shell level : 1
user config file : /home/rbarb/.condarc
populated config files : /home/rbarb/.condarc
conda version : 22.9.0
conda-build version : 3.24.0
python version : 3.9.7.final.0
virtual packages : __cuda=12.2=0
__linux=5.10.16.3=0
__glibc=2.31=0
__unix=0=0
__archspec=1=x86_64
base environment : /home/rbarb/anaconda3 (writable)
conda av data dir : /home/rbarb/anaconda3/etc/conda
conda av metadata url : None
channel URLs : https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://conda.anaconda.org/bioconda/linux-64
https://conda.anaconda.org/bioconda/noarch
https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /home/rbarb/anaconda3/pkgs
/home/rbarb/.conda/pkgs
envs directories : /home/rbarb/anaconda3/envs
/home/rbarb/.conda/envs
platform : linux-64
user-agent : conda/22.9.0 requests/2.26.0 CPython/3.9.7 Linux/5.10.16.3-microsoft-standard-WSL2 ubuntu/20.04.4 glibc/2.31
UID:GID : 1000:1000
netrc file : None
offline mode : False`
Anything that can be done about this?
Thank you in advance!