From 43e52149108643c84ce155d894cbc2bbce2bfb15 Mon Sep 17 00:00:00 2001 From: Sebastian Schmidt Date: Mon, 11 May 2026 14:53:28 +0300 Subject: [PATCH] chore: Release --- Cargo.lock | 16 ++++++++-------- generic_a_star/Cargo.toml | 2 +- lib_ts_chainalign/Cargo.toml | 6 +++--- lib_tsalign/Cargo.toml | 6 +++--- lib_tsshow/Cargo.toml | 4 ++-- python_bindings/Cargo.toml | 6 +++--- seed_chain/Cargo.toml | 4 ++-- tsalign-tests/Cargo.toml | 2 +- tsalign/Cargo.toml | 10 +++++----- 9 files changed, 28 insertions(+), 28 deletions(-) diff --git a/Cargo.lock b/Cargo.lock index 98b3235..01588df 100644 --- a/Cargo.lock +++ b/Cargo.lock @@ -417,7 +417,7 @@ checksum = "e6d5a32815ae3f33302d95fdcb2ce17862f8c65363dcfd29360480ba1001fc9c" [[package]] name = "generic_a_star" -version = "2.0.5" +version = "2.1.0" dependencies = [ "binary-heap-plus", "compare", @@ -548,7 +548,7 @@ checksum = "bbd2bcb4c963f2ddae06a2efc7e9f3591312473c50c6685e1f298068316e66fe" [[package]] name = "lib_ts_chainalign" -version = "2.0.5" +version = "2.1.0" dependencies = [ "binary-heap-plus", "bincode", @@ -568,7 +568,7 @@ dependencies = [ [[package]] name = "lib_tsalign" -version = "2.0.5" +version = "2.1.0" dependencies = [ "binary-heap-plus", "compact-genome", @@ -589,7 +589,7 @@ dependencies = [ [[package]] name = "lib_tsshow" -version = "2.0.5" +version = "2.1.0" dependencies = [ "ena", "itertools", @@ -804,7 +804,7 @@ dependencies = [ [[package]] name = "py_lib_tsalign" -version = "2.0.5" +version = "2.1.0" dependencies = [ "compact-genome", "lib_tsalign", @@ -1008,7 +1008,7 @@ dependencies = [ [[package]] name = "seed_chain" -version = "2.0.5" +version = "2.1.0" dependencies = [ "compact-genome", "generic_a_star", @@ -1360,7 +1360,7 @@ checksum = "2b939c825d0c4295ac520f7b479927c1e5b458c9107a9d6f5ba65bc867bb93a5" [[package]] name = "tsalign" -version = "2.0.5" +version = "2.1.0" dependencies = [ "anyhow", "bincode", @@ -1381,7 +1381,7 @@ dependencies = [ [[package]] name = "tsalign-tests" -version = "2.0.5" +version = "2.1.0" dependencies = [ "anyhow", "clap", diff --git a/generic_a_star/Cargo.toml b/generic_a_star/Cargo.toml index 6d6a775..bc9b5bc 100644 --- a/generic_a_star/Cargo.toml +++ b/generic_a_star/Cargo.toml @@ -1,7 +1,7 @@ [package] name = "generic_a_star" description = "A generic implementation of the A* algorithm" -version = "2.0.5" +version = "2.1.0" edition.workspace = true rust-version.workspace = true license.workspace = true diff --git a/lib_ts_chainalign/Cargo.toml b/lib_ts_chainalign/Cargo.toml index 77a8b38..cfa6d7f 100644 --- a/lib_ts_chainalign/Cargo.toml +++ b/lib_ts_chainalign/Cargo.toml @@ -2,15 +2,15 @@ name = "lib_ts_chainalign" description = "A chaining-based sequence-to-sequence aligner that accounts for template switches" authors = ["Sebastian Schmidt "] -version = "2.0.5" +version = "2.1.0" license.workspace = true edition.workspace = true rust-version.workspace = true repository.workspace = true [dependencies] -generic_a_star = { version = "2.0.5", path = "../generic_a_star" } -lib_tsalign = { version = "2.0.5", path = "../lib_tsalign" } +generic_a_star = { version = "2.1.0", path = "../generic_a_star" } +lib_tsalign = { version = "2.1.0", path = "../lib_tsalign" } ndarray = { version = "0.17.1", features = ["serde"] } num-traits.workspace = true serde = { workspace = true, features = ["derive"] } diff --git a/lib_tsalign/Cargo.toml b/lib_tsalign/Cargo.toml index 304dc31..26b65f8 100644 --- a/lib_tsalign/Cargo.toml +++ b/lib_tsalign/Cargo.toml @@ -2,7 +2,7 @@ name = "lib_tsalign" description = "A sequence-to-sequence aligner that accounts for template switches" authors = ["Sebastian Schmidt "] -version = "2.0.5" +version = "2.1.0" license.workspace = true edition.workspace = true rust-version.workspace = true @@ -26,9 +26,9 @@ thiserror = "2.0.3" num-traits.workspace = true serde = { workspace = true, features = ["derive"], optional = true } noisy_float = { version = "0.2.0" } -generic_a_star = { version = "2.0.5", path = "../generic_a_star" } +generic_a_star = { version = "2.1.0", path = "../generic_a_star" } log.workspace = true rustc-hash = "2.1.1" -seed_chain = { version = "2.0.5", path = "../seed_chain" } +seed_chain = { version = "2.1.0", path = "../seed_chain" } extend_map = "0.14.3" template-switch-error-free-inners = "0.1.1" diff --git a/lib_tsshow/Cargo.toml b/lib_tsshow/Cargo.toml index 315b888..33e03d7 100644 --- a/lib_tsshow/Cargo.toml +++ b/lib_tsshow/Cargo.toml @@ -3,13 +3,13 @@ name = "lib_tsshow" description = "A visualiser for template-switch alignments" license.workspace = true authors = ["Sebastian Schmidt "] -version = "2.0.5" +version = "2.1.0" edition.workspace = true rust-version.workspace = true repository.workspace = true [dependencies] -lib_tsalign = { version = "2.0.5", path = "../lib_tsalign" } +lib_tsalign = { version = "2.1.0", path = "../lib_tsalign" } log.workspace = true svg = "0.18.0" resvg = "0.45.0" diff --git a/python_bindings/Cargo.toml b/python_bindings/Cargo.toml index 9bd9664..884bbfa 100644 --- a/python_bindings/Cargo.toml +++ b/python_bindings/Cargo.toml @@ -6,7 +6,7 @@ authors = [ "Sebastian Schmidt ", "Jasper Krauter ", ] -version = "2.0.5" +version = "2.1.0" edition.workspace = true rust-version.workspace = true repository.workspace = true @@ -18,10 +18,10 @@ crate-type = ["cdylib"] [dependencies] pyo3 = "0.26" -lib_tsalign = { version = "2.0.5", path = "../lib_tsalign", features = [ +lib_tsalign = { version = "2.1.0", path = "../lib_tsalign", features = [ "serde", ] } -lib_tsshow = { version = "2.0.5", path = "../lib_tsshow" } +lib_tsshow = { version = "2.1.0", path = "../lib_tsshow" } serde.workspace = true pythonize = "0.26" pyo3-log = "0.13" diff --git a/seed_chain/Cargo.toml b/seed_chain/Cargo.toml index 7e65860..d399f24 100644 --- a/seed_chain/Cargo.toml +++ b/seed_chain/Cargo.toml @@ -3,7 +3,7 @@ name = "seed_chain" description = "A seeding and generic chaining mechanism for sequence-to-sequence alignment" license.workspace = true authors = ["Sebastian Schmidt "] -version = "2.0.5" +version = "2.1.0" edition.workspace = true rust-version.workspace = true repository.workspace = true @@ -12,5 +12,5 @@ repository.workspace = true [dependencies] compact-genome.workspace = true log.workspace = true -generic_a_star = { version = "2.0.5", path = "../generic_a_star" } +generic_a_star = { version = "2.1.0", path = "../generic_a_star" } num-traits.workspace = true diff --git a/tsalign-tests/Cargo.toml b/tsalign-tests/Cargo.toml index 8fe00b3..446ba90 100644 --- a/tsalign-tests/Cargo.toml +++ b/tsalign-tests/Cargo.toml @@ -2,7 +2,7 @@ name = "tsalign-tests" license.workspace = true authors = ["Sebastian Schmidt ", "Jasper Krauter "] -version = "2.0.5" +version = "2.1.0" edition.workspace = true rust-version.workspace = true repository.workspace = true diff --git a/tsalign/Cargo.toml b/tsalign/Cargo.toml index f5c631f..383c791 100644 --- a/tsalign/Cargo.toml +++ b/tsalign/Cargo.toml @@ -3,18 +3,18 @@ name = "tsalign" description = "A sequence-to-sequence aligner that accounts for template switches" license.workspace = true authors = ["Sebastian Schmidt "] -version = "2.0.5" +version = "2.1.0" edition.workspace = true rust-version.workspace = true repository.workspace = true [dependencies] -generic_a_star = { version = "2.0.5", path = "../generic_a_star" } -lib_tsalign = { version = "2.0.5", path = "../lib_tsalign", features = [ +generic_a_star = { version = "2.1.0", path = "../generic_a_star" } +lib_tsalign = { version = "2.1.0", path = "../lib_tsalign", features = [ "serde", ] } -lib_ts_chainalign = { version = "2.0.5", path = "../lib_ts_chainalign" } -lib_tsshow = { version = "2.0.5", path = "../lib_tsshow" } +lib_ts_chainalign = { version = "2.1.0", path = "../lib_ts_chainalign" } +lib_tsshow = { version = "2.1.0", path = "../lib_tsshow" } clap.workspace = true compact-genome = { workspace = true, features = ["io"] } traitsequence.workspace = true