fullstat_allplot.yml

name: fullstat_allplot # Kotaro Yama
# dropped the Docker container use (DLW April 2025)

on:
  workflow_dispatch:
  push:
    branches: [main]
  pull_request:
    branches: [main]

defaults:
  run:
    shell: bash -l {0}

jobs:
  build:
    name: fullStatAllPlot
    runs-on: ubuntu-latest
    timeout-minutes: 60
    env:
      PYTHONPATH: ${{ github.workspace }}
    steps:
      - uses: actions/checkout@v3
      - uses: conda-incubator/setup-miniconda@v2
        with:
          activate-environment: test_env
          python-version: 3.12
          auto-activate-base: false

      - name: Install Boost
        run: sudo apt-get update && sudo apt-get install -y libboost-all-dev
      - name: Install Eigen
        run: sudo apt-get update && sudo apt-get install -y libeigen3-dev

      - name: make C++
        run: |
          cd cell2fire/Cell2FireC
          make
      - name: install dependencies
        run: |
          pip install -r requirements.txt
          pip install flake8
      - name: setup the program
        run: |
          pip install -e .
  
      - name: Lint with flake8
        run: |
          # stop the build if there are Python syntax errors or undefined names
          flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
          # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
          flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics

      - name: create input data
        run: |
           cd cell2fire
           python main.py --input-instance-folder ../data/dogrib/ --output-folder ../results/dogrib_n100cv05 --ignitions --sim-years 1 --nsims 3 --grids --finalGrid --weather rows --nweathers 1 --Fire-Period-Length 1.0 --output-messages --ROS-CV 0.5 --seed 123 --IgnitionRad 0 --stats --allPlots
      - name: Install pytest
        run: pip install pytest

      - name: run tests
        run: |
          cd tests
          pytest fullstat_allplot.py