From 3d23adb20c5f7bc5182aaf98d532b168367bc842 Mon Sep 17 00:00:00 2001 From: Kyle Ferriter Date: Wed, 10 Sep 2025 11:43:33 -0400 Subject: [PATCH 1/2] add explicit pg optional dependency group to gene normalizer transitive dependency --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index e1da952..81a2f1f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -14,7 +14,7 @@ dependencies = [ "flask~=3.0.3", "requests~=2.0", "variation-normalizer @ git+https://github.com/cancervariants/variation-normalization@0.15.0", - # "variation-normalizer-manuscript @ git+https://github.com/GenomicMedLab/variation-normalizer-manuscript@issue-116", + "gene-normalizer[pg] >=0.9.0", ] dynamic = ["version"] From fa5c079f25c82f49c70020502a420412f942c588 Mon Sep 17 00:00:00 2001 From: Kyle Ferriter Date: Wed, 10 Sep 2025 11:44:42 -0400 Subject: [PATCH 2/2] whitespace --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 81a2f1f..37dd140 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -14,7 +14,7 @@ dependencies = [ "flask~=3.0.3", "requests~=2.0", "variation-normalizer @ git+https://github.com/cancervariants/variation-normalization@0.15.0", - "gene-normalizer[pg] >=0.9.0", + "gene-normalizer[pg]>=0.9.0", ] dynamic = ["version"]