-
Notifications
You must be signed in to change notification settings - Fork 5
Open
Labels
bugSomething isn't workingSomething isn't working
Description
Running the fft plugin on kymograph tif(s) results in the following error. Probably due to short number of points (like 1000). Really not sure ...
Traceback (most recent call last):
File "/Users/cudmore/Sites/SanPy/sanpy/interface/sanpy_app.py", line 1004, in slot_contextMenu
newPlugin = self.myPlugins.runPlugin(pluginName, ba, show=False)
File "/Users/cudmore/Sites/SanPy/sanpy/interface/bPlugins.py", line 163, in runPlugin
self.pluginDict[pluginName]['constructor'](ba=ba, bPlugin=self, startStop=startStop)
File "/Users/cudmore/Sites/SanPy/sanpy/interface/plugins/fftPlugin.py", line 477, in __init__
self.replot2(switchFile=True)
File "/Users/cudmore/Sites/SanPy/sanpy/interface/plugins/fftPlugin.py", line 793, in replot2
self.replot_fft2()
File "/Users/cudmore/Sites/SanPy/sanpy/interface/plugins/fftPlugin.py", line 888, in replot_fft2
yFiltered_Butter = scipy.signal.sosfiltfilt(self.sos, yDetrend, axis=0)
File "/opt/miniconda3/envs/sanpy-env/lib/python3.9/site-packages/scipy/signal/_signaltools.py", line 4335, in sosfiltfilt
edge, ext = _validate_pad(padtype, padlen, x, axis,
File "/opt/miniconda3/envs/sanpy-env/lib/python3.9/site-packages/scipy/signal/_signaltools.py", line 4105, in _validate_pad
raise ValueError("The length of the input vector x must be greater "
ValueError: The length of the input vector x must be greater than padlen, which is 423.
Reactions are currently unavailable
Metadata
Metadata
Assignees
Labels
bugSomething isn't workingSomething isn't working