tierpsytools

tierpsytools is a Python library for dealing with metadata in worm screening experiments and tierpsy feature processing.

Installation

To install tierpsytools clone the repository from github:

git clone https://github.com/em812/tierpsytools_python.git

Go in the tierpsytools_python directory:

cd tierpsytools_python

and install the package with:

pip install -e .

You can import tierpsytools and use modules and functions as in:

import tierpsytools

filtered_features = tierpsytools.filter_features.drop_ventrally_signed(features)

or import modules and functions from tierpsytools as in:

from tierpsytools.filter_features import drop_ventrally_signed

filtered_features = drop_ventrally_signed(features)