Handle switches in same order

[eurochriskelly]

The following is confusing

mlproj deploy good

mlproj -e foo deploy good

mlproj deploy -s bar good

mlproj -e foo deploy -s bar good

but

mlproj -e foo -s bar deploy bad

mlproj -s bar deploy bad

mlproj deploy - foo bad

mlproj deploy -e foo -s bar bad

it would be idiomatic to process named options separately. Many libraries do this automatically such as optimist and yargs.