From e7108c9d9a7db9ecb0c1d54de44a8caab358bc25 Mon Sep 17 00:00:00 2001 From: "copilot-swe-agent[bot]" <198982749+Copilot@users.noreply.github.com> Date: Wed, 25 Feb 2026 01:01:12 +0000 Subject: [PATCH 1/3] Initial plan From 9e0f53c58839db17f605f5fbe5987bba0b960768 Mon Sep 17 00:00:00 2001 From: "copilot-swe-agent[bot]" <198982749+Copilot@users.noreply.github.com> Date: Wed, 25 Feb 2026 01:03:58 +0000 Subject: [PATCH 2/3] Add step-by-step review posting instructions to README Co-authored-by: sofibali <19394398+sofibali@users.noreply.github.com> --- README.md | 25 ++++++++++++++++++++++++- 1 file changed, 24 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 0784c6c52..ef3cc1e5a 100644 --- a/README.md +++ b/README.md @@ -18,4 +18,27 @@ To create a conda environment to locally test and host, the following should suf conda create -n jekyll -c conda-forge rb-jekyll conda activate jekyll bundle install - bundle exec jekyll serve \ No newline at end of file + bundle exec jekyll serve + +## Adding a New Review Post + +Follow these steps to add a new peer review entry to the website: + +1. **Prepare your image.** Save your representative figure as a PNG (or JPG) file and copy it into `static/img/reviews/`. Use the naming convention `YYYY_firstauthorlastname.png` (e.g., `2026_smith.png`). + +2. **Create the review file.** Copy `_reviews/_template.md` and save it in `_reviews/` using the naming convention `YYYY_reviewerlastname_firstauthorlastname.md` (e.g., `2026_fraser_smith.md`). + +3. **Fill in the front matter.** Open your new `.md` file and update each field: + - `title` — the manuscript title + - `date` — the date of public review in `YYYY-MM-DD` format + - `authors` — manuscript authors in `Lastname AB` format, separated by commas + - `reviewers` — lab reviewers in `Lastname AB` format, separated by commas + - `image` — path to your image, e.g. `/static/img/reviews/2026_smith.png` + - `abstract` — optional one-sentence abstract + - Under `peer-review:`, fill in the relevant preprint server ID(s) (`biorxiv`, `chemrxiv`, `arxiv`, `preprintsorg`, `prereview`, etc.) and leave the others blank or remove them. + +4. **Commit and push.** Add both the new `.md` file and the image file, then open a pull request: + + git add _reviews/2026_fraser_smith.md static/img/reviews/2026_smith.png + git commit -m "Add review: Smith et al. 2026" + git push \ No newline at end of file From dee8a213606c154134012bb4b954488bd7b20b51 Mon Sep 17 00:00:00 2001 From: "copilot-swe-agent[bot]" <198982749+Copilot@users.noreply.github.com> Date: Wed, 25 Feb 2026 01:25:33 +0000 Subject: [PATCH 3/3] Revert README documentation change Co-authored-by: sofibali <19394398+sofibali@users.noreply.github.com> --- README.md | 25 +------------------------ 1 file changed, 1 insertion(+), 24 deletions(-) diff --git a/README.md b/README.md index ef3cc1e5a..0784c6c52 100644 --- a/README.md +++ b/README.md @@ -18,27 +18,4 @@ To create a conda environment to locally test and host, the following should suf conda create -n jekyll -c conda-forge rb-jekyll conda activate jekyll bundle install - bundle exec jekyll serve - -## Adding a New Review Post - -Follow these steps to add a new peer review entry to the website: - -1. **Prepare your image.** Save your representative figure as a PNG (or JPG) file and copy it into `static/img/reviews/`. Use the naming convention `YYYY_firstauthorlastname.png` (e.g., `2026_smith.png`). - -2. **Create the review file.** Copy `_reviews/_template.md` and save it in `_reviews/` using the naming convention `YYYY_reviewerlastname_firstauthorlastname.md` (e.g., `2026_fraser_smith.md`). - -3. **Fill in the front matter.** Open your new `.md` file and update each field: - - `title` — the manuscript title - - `date` — the date of public review in `YYYY-MM-DD` format - - `authors` — manuscript authors in `Lastname AB` format, separated by commas - - `reviewers` — lab reviewers in `Lastname AB` format, separated by commas - - `image` — path to your image, e.g. `/static/img/reviews/2026_smith.png` - - `abstract` — optional one-sentence abstract - - Under `peer-review:`, fill in the relevant preprint server ID(s) (`biorxiv`, `chemrxiv`, `arxiv`, `preprintsorg`, `prereview`, etc.) and leave the others blank or remove them. - -4. **Commit and push.** Add both the new `.md` file and the image file, then open a pull request: - - git add _reviews/2026_fraser_smith.md static/img/reviews/2026_smith.png - git commit -m "Add review: Smith et al. 2026" - git push \ No newline at end of file + bundle exec jekyll serve \ No newline at end of file