From 451d0b90de1c45b3e4ea2386e0abd297fd4c19fe Mon Sep 17 00:00:00 2001 From: Arek Gladki Date: Thu, 27 Nov 2025 17:28:31 +0100 Subject: [PATCH 1/5] feat: add support for the `time-course` experiment --- DESCRIPTION | 4 ++-- NEWS.md | 3 +++ R/experiments.R | 6 ++++-- 3 files changed, 9 insertions(+), 4 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 374dccc3..e744155b 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,8 +1,8 @@ Package: gDRutils Type: Package Title: A package with helper functions for processing drug response data -Version: 1.9.2 -Date: 2025-11-03 +Version: 1.9.3 +Date: 2025-11-27 Authors@R: c(person("Bartosz", "Czech", role=c("aut"), comment = c(ORCID = "0000-0002-9908-3007")), person("Arkadiusz", "Gladki", role=c("cre", "aut"), email="gladki.arkadiusz@gmail.com", diff --git a/NEWS.md b/NEWS.md index 3ff4073e..d42bfb12 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,3 +1,6 @@ +## gDRutils 1.9.2 - 2025-11-03 +* add support for the `time-course` experiment + ## gDRutils 1.9.2 - 2025-11-03 * update merge_SE function to merge drugs with different batches together diff --git a/R/experiments.R b/R/experiments.R index 32d2adb8..2703316d 100644 --- a/R/experiments.R +++ b/R/experiments.R @@ -1,10 +1,12 @@ ## The following are the default values that will be used for handling MAE experiments SUPPORTED_EXPERIMENTS <- - c(sa = "single-agent", combo = "combination", "cd" = "co-dilution") + c(sa = "single-agent", combo = "combination", "cd" = "co-dilution", "time_course" = "time-course") + EXPERIMENT_GROUPS <- list(`single-agent` = c(`single-agent` = "single-agent", `co-dilution` = "co-dilution"), - combination = "combination") + combination = "combination", + `time-course` = "time-course") #' get_supported_experiments #' From 14cd449613bba4446cb29692e9fb8edf772a866d Mon Sep 17 00:00:00 2001 From: Arek Gladki <41166437+gladkia@users.noreply.github.com> Date: Thu, 27 Nov 2025 18:08:19 +0100 Subject: [PATCH 2/5] Update NEWS.md Co-authored-by: gemini-code-assist[bot] <176961590+gemini-code-assist[bot]@users.noreply.github.com> --- NEWS.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/NEWS.md b/NEWS.md index d42bfb12..154464fa 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,4 +1,4 @@ -## gDRutils 1.9.2 - 2025-11-03 +## gDRutils 1.9.3 - 2025-11-27 * add support for the `time-course` experiment ## gDRutils 1.9.2 - 2025-11-03 From af5b28874d8e96d0a2c01c0835f95395d35024d6 Mon Sep 17 00:00:00 2001 From: Arek Gladki Date: Thu, 27 Nov 2025 19:41:14 +0100 Subject: [PATCH 3/5] chore: standardize --- R/experiments.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/R/experiments.R b/R/experiments.R index 2703316d..f0fdc5ad 100644 --- a/R/experiments.R +++ b/R/experiments.R @@ -1,6 +1,6 @@ ## The following are the default values that will be used for handling MAE experiments SUPPORTED_EXPERIMENTS <- - c(sa = "single-agent", combo = "combination", "cd" = "co-dilution", "time_course" = "time-course") + c(sa = "single-agent", combo = "combination", "cd" = "co-dilution", "time-course" = "time-course") EXPERIMENT_GROUPS <- list(`single-agent` = c(`single-agent` = "single-agent", From 854163fecea651a648689acecbdb9347399bff81 Mon Sep 17 00:00:00 2001 From: Arek Gladki Date: Fri, 28 Nov 2025 08:37:51 +0100 Subject: [PATCH 4/5] build: trigger build From 2f538c64082a37817a35859ac57ce9742008cb3e Mon Sep 17 00:00:00 2001 From: Arek Gladki Date: Fri, 28 Nov 2025 13:31:32 +0100 Subject: [PATCH 5/5] build: trigger build