Test & Lint Python

fix: add missing agent-context extension entries to Cline `_expected_files` #3445

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Run time

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Job	Run time
ruff	10s
pytest (ubuntu-latest, 3.11)	1m 28s
pytest (windows-latest, 3.12)	4m 34s
pytest (windows-latest, 3.13)	4m 22s
pytest (windows-latest, 3.11)	4m 38s
pytest (ubuntu-latest, 3.12)	2m 23s
pytest (ubuntu-latest, 3.13)	2m 26s
	20m 1s