diff --git a/.claude/skills/add-docs-page/SKILL.md b/.claude/skills/add-docs-page/SKILL.md new file mode 100644 index 0000000..4dee0d0 --- /dev/null +++ b/.claude/skills/add-docs-page/SKILL.md @@ -0,0 +1,28 @@ +--- +name: add-docs-page +description: Scaffold a new MkDocs documentation page and wire it into the navigation. Use when asked to "add a docs page", "add a guide", or "document" a feature in the site. +--- + +# Add a docs page + +API reference pages are auto-generated from docstrings by +`docs/generate_api.py`; do not create those by hand. Use this for narrative +pages (guides, overviews, etc.). + +1. Create the Markdown file under `docs/` (group guides under `docs/guides/`). + Follow the tone/format of existing pages such as `docs/guides/example.md`. +2. Add the page to the `nav:` tree in `mkdocs.yml` under the appropriate + section, e.g.: + ```yaml + - Guides: + - guides/index.md + - My Feature: guides/my-feature.md + ``` +3. Cross-reference symbols with mkdocstrings autorefs (e.g. `[pypkg.foo.bar][]`) + where helpful. +4. Build with strict mode to catch broken links and nav issues: + ```bash + uv sync --group docs + mkdocs serve # preview locally + tox -e docs # strict build (must pass) + ``` diff --git a/.claude/skills/check/SKILL.md b/.claude/skills/check/SKILL.md new file mode 100644 index 0000000..72e2744 --- /dev/null +++ b/.claude/skills/check/SKILL.md @@ -0,0 +1,29 @@ +--- +name: check +description: Run the full local quality gate (prek hooks + tox test matrix) before committing or opening a pull request. Use when asked to "check", "lint", "run CI locally", or verify a change is ready. +--- + +# Run the local quality gate + +Reproduce what CI runs, in order. Stop and report on the first failure. + +1. Sync and activate the environment: + ```bash + uv sync + source .venv/bin/activate + ``` +2. Run all pre-commit hooks (Ruff, mypy, typos, complexipy, ...): + ```bash + prek run --all-files + ``` +3. Run the test suite (fast path — current interpreter): + ```bash + pytest + ``` +4. Optionally run the full matrix and docs build (slower): + ```bash + tox + ``` + +Report which steps passed/failed. If a hook auto-fixed files, re-stage them and +re-run step 2. diff --git a/.claude/skills/release/SKILL.md b/.claude/skills/release/SKILL.md new file mode 100644 index 0000000..6cbe63c --- /dev/null +++ b/.claude/skills/release/SKILL.md @@ -0,0 +1,28 @@ +--- +name: release +description: Cut a new release by tagging a version and publishing via GitHub, which triggers the PyPI Trusted Publishing and docs-deploy workflows. Use when asked to "make a release", "cut a version", or "publish". +--- + +# Cut a release + +Versioning is derived from git tags via setuptools_scm, and publishing is +automated by `.github/workflows/publish.yml`. See +`docs/contributing/releases.md` for the authoritative process. + +1. Confirm `main` is green (CI passing) and decide the version `{VERSION}` + (semver `major.minor.patch`, optional PEP 440 pre/post/dev suffix). +2. Create and push an annotated, signed tag prefixed with `v`: + ```bash + git tag -s v{VERSION} -m "pypkg v{VERSION}" + git push origin v{VERSION} + ``` +3. Create a GitHub Release from the tag titled `pypkg v{VERSION}`: + - Official release: use "Generate release notes", set the previous official + tag as the baseline, add an "Upgrade Steps" section, verify PR labels sort + the notes correctly, and mark it "latest". + - Pre-release: skip generated notes and mark it "pre-release". +4. Publishing the release triggers the `publish` workflow, which builds with + `uv build`, uploads to PyPI via Trusted Publishing, and deploys versioned + docs with `mike`. Confirm both the PyPI upload and the docs deploy succeeded. + +Do not push tags or create releases without explicit confirmation from the user. diff --git a/.claude/skills/rename-template/SKILL.md b/.claude/skills/rename-template/SKILL.md new file mode 100644 index 0000000..27085f8 --- /dev/null +++ b/.claude/skills/rename-template/SKILL.md @@ -0,0 +1,36 @@ +--- +name: rename-template +description: Replace the template placeholders (pypkg, pypkg-author, gpauloski/python-template) when starting a new project from this template. Use when asked to "rename the template", "set up a new project", or "replace pypkg". +--- + +# Rename template placeholders + +The template uses placeholders that must be replaced for a new project. Ask the +user for their values first if not provided: + +- `pypkg` — the Python package/import name (e.g. `mypkg`). +- `pypkg-author` — the GitHub org/user or author handle. +- `gpauloski/python-template` — the new `owner/repo` slug. +- author name, email, and description for `pyproject.toml`. + +Steps: + +1. Find all occurrences so nothing is missed: + ```bash + git grep -n -e pypkg -e pypkg-author -e gpauloski/python-template + ``` +2. Rename the package directory: + ```bash + git mv pypkg + ``` +3. Replace the placeholders across the tree (review before running a bulk + `sed`). Key files: `pyproject.toml`, `mkdocs.yml`, `README.md`, + `.github/**`, `docs/**`, and the custom template + `docs/templates/python/material/module.html.jinja`. +4. Update author, email, description, and URLs in `pyproject.toml`, and the + `` placeholder in `.github/CODE_OF_CONDUCT.md`. +5. Verify nothing was missed and the project still works: + ```bash + git grep -n pypkg # should return nothing meaningful + uv sync && pytest + ``` diff --git a/.github/CODE_OF_CONDUCT.md b/.github/CODE_OF_CONDUCT.md index ee99f90..98946a0 100644 --- a/.github/CODE_OF_CONDUCT.md +++ b/.github/CODE_OF_CONDUCT.md @@ -60,7 +60,7 @@ representative at an online or offline event. Instances of abusive, harassing, or otherwise unacceptable behavior may be reported to the community leaders responsible for enforcement at -jgpauloski@uchicago.edu. +. All complaints will be reviewed and investigated promptly and fairly. All community leaders are obligated to respect the privacy and security of the diff --git a/.github/ISSUE_TEMPLATE/01_bug.yml b/.github/ISSUE_TEMPLATE/01_bug.yml index 3dae025..be4dc46 100644 --- a/.github/ISSUE_TEMPLATE/01_bug.yml +++ b/.github/ISSUE_TEMPLATE/01_bug.yml @@ -2,20 +2,20 @@ name: Bug Report description: Report errors or unexpected results. labels: ["bug"] assignees: - - foobar-bug-assign-dev + - pypkg-bug-assign-dev body: - type: textarea id: install attributes: - label: How did you install foobar? + label: How did you install pypkg? description: > E.g., install via pip, install from source, etc. **Note:** this will be rendered as console text automatically. placeholder: | - $ pip install foobar - Collecting foobar + $ pip install pypkg + Collecting pypkg ... - Successfully installed foobar... + Successfully installed pypkg... render: console validations: required: true @@ -23,7 +23,7 @@ body: - type: input id: version attributes: - label: What version of foobar are you using? + label: What version of pypkg are you using? description: > Package version if installed via Pip or commit ID if installed from source. diff --git a/.github/ISSUE_TEMPLATE/02_enhancement.yml b/.github/ISSUE_TEMPLATE/02_enhancement.yml index b324e5b..16429a6 100644 --- a/.github/ISSUE_TEMPLATE/02_enhancement.yml +++ b/.github/ISSUE_TEMPLATE/02_enhancement.yml @@ -2,7 +2,7 @@ name: Enhancement Request description: Request a new feature or enhancement. labels: ["enhancement"] assignees: - - foobar-enh-assign-dev + - pypkg-enh-assign-dev body: - type: textarea id: request diff --git a/.github/ISSUE_TEMPLATE/03_docs.yml b/.github/ISSUE_TEMPLATE/03_docs.yml index e6d1d82..c726264 100644 --- a/.github/ISSUE_TEMPLATE/03_docs.yml +++ b/.github/ISSUE_TEMPLATE/03_docs.yml @@ -2,7 +2,7 @@ name: Documentation Improvements description: Suggest improvements to the documentation. labels: ["documentation"] assignees: - - foobar-doc-assignee-dev + - pypkg-doc-assignee-dev body: - type: textarea id: freeform diff --git a/.github/pull_request_template.md b/.github/pull_request_template.md index ee1bae0..1787493 100644 --- a/.github/pull_request_template.md +++ b/.github/pull_request_template.md @@ -28,7 +28,7 @@ N/A Please confirm the PR meets the following requirements. - [ ] Relevant tags are added (breaking, bug, dependencies, documentation, enhancement, refactor). -- [ ] Code changes pass `pre-commit` (e.g., ruff, mypy, etc.). +- [ ] Code changes pass `prek` (e.g., ruff, mypy, typos, etc.). - [ ] Tests have been added to show the fix is effective or that the new feature works. - [ ] New and existing unit tests pass locally with the changes. - [ ] Docs have been updated and reviewed if relevant. diff --git a/.github/workflows/check-docs.yml b/.github/workflows/check-docs.yml index 60d1123..203874d 100644 --- a/.github/workflows/check-docs.yml +++ b/.github/workflows/check-docs.yml @@ -10,36 +10,23 @@ on: pull_request: workflow_dispatch: +permissions: + contents: read + jobs: check-docs: timeout-minutes: 10 - runs-on: ubuntu-latest steps: - name: Checkout uses: actions/checkout@v7 - - name: Set up Python 3.11 - uses: actions/setup-python@v6 - with: - python-version: '3.11' - - - name: Get pip cache dir - id: pip-cache-dir - run: echo "PIP_CACHE_DIR=$(pip cache dir)" >> $GITHUB_ENV - - - name: Use pip cache - id: pip-cache - uses: actions/cache@v6 + - name: Install uv + uses: astral-sh/setup-uv@v6 with: - path: ${{ env.PIP_CACHE_DIR }} - key: docs-ubuntu-latest-pip-3.11-${{ hashFiles('pyproject.toml') }} - restore-keys: | - docs-ubuntu-latest-pip-3.11- - - - name: Install Packages - run: pip install --upgrade setuptools pip tox virtualenv + enable-cache: true + cache-python: true - - name: Run Tox to build docs - run: tox -e docs + - name: Build docs with tox + run: uv run tox -e docs diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml index f0006fe..01a05ac 100644 --- a/.github/workflows/docs.yml +++ b/.github/workflows/docs.yml @@ -5,10 +5,12 @@ on: branches: [main] workflow_dispatch: +permissions: + contents: write + jobs: docs: timeout-minutes: 10 - runs-on: ubuntu-latest steps: @@ -17,33 +19,19 @@ jobs: with: fetch-depth: 0 - - name: Set up Python 3.11 - uses: actions/setup-python@v6 - with: - python-version: '3.11' - - - name: Get pip cache dir - id: pip-cache-dir - run: echo "PIP_CACHE_DIR=$(pip cache dir)" >> $GITHUB_ENV - - - name: Use pip cache - id: pip-cache - uses: actions/cache@v6 + - name: Install uv + uses: astral-sh/setup-uv@v6 with: - path: ${{ env.PIP_CACHE_DIR }} - key: docs-ubuntu-latest-pip-3.11-${{ hashFiles('pyproject.toml') }} - restore-keys: | - docs-ubuntu-latest-pip-3.11- + enable-cache: true + cache-python: true - - name: Install Packages - run: | - pip install --upgrade setuptools pip - pip install .[docs] + - name: Install docs dependencies + run: uv sync --group docs - name: Configure git run: | git config --local user.name "GitHub Actions Bot" git config --local user.email "41898282+github-actions[bot]@users.noreply.github.com" + - name: Deploy docs for main:latest to gh-pages branch - run: | - mike deploy --push --update-aliases main + run: uv run mike deploy --push --update-aliases main diff --git a/.github/workflows/prek-autoupdate.yml b/.github/workflows/prek-autoupdate.yml new file mode 100644 index 0000000..8abe954 --- /dev/null +++ b/.github/workflows/prek-autoupdate.yml @@ -0,0 +1,47 @@ +name: prek-autoupdate + +# Weekly refresh of pinned hook versions in .pre-commit-config.yaml. Runs +# `prek autoupdate` and opens a pull request if anything changed. Replaces the +# autoupdate service that pre-commit.ci provided. +on: + schedule: + # Mondays at 06:00 UTC. + - cron: "0 6 * * 1" + workflow_dispatch: + +permissions: + contents: write + pull-requests: write + +jobs: + autoupdate: + timeout-minutes: 10 + runs-on: ubuntu-latest + + steps: + - name: Checkout + uses: actions/checkout@v7 + + - name: Install uv + uses: astral-sh/setup-uv@v6 + with: + enable-cache: true + cache-python: true + + - name: Install the project + run: uv sync + + - name: Run prek autoupdate + run: uv run prek autoupdate + + - name: Open a pull request + uses: peter-evans/create-pull-request@v7 + with: + commit-message: "[prek] autoupdate hooks" + title: "[prek] autoupdate hooks" + body: > + Automated weekly update of pre-commit hook versions via + `prek autoupdate`. + branch: prek-autoupdate + delete-branch: true + labels: dependencies diff --git a/.github/workflows/prek.yml b/.github/workflows/prek.yml new file mode 100644 index 0000000..39c438e --- /dev/null +++ b/.github/workflows/prek.yml @@ -0,0 +1,31 @@ +name: prek + +on: + push: + branches: [main, test-me-*] + pull_request: + workflow_dispatch: + +permissions: + contents: read + +jobs: + prek: + timeout-minutes: 10 + runs-on: ubuntu-latest + + steps: + - name: Checkout + uses: actions/checkout@v7 + + - name: Install uv + uses: astral-sh/setup-uv@v6 + with: + enable-cache: true + cache-python: true + + - name: Install the project + run: uv sync + + - name: Run prek + run: uv run prek run --all-files --show-diff-on-failure diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml index ed0525a..9479ad1 100644 --- a/.github/workflows/publish.yml +++ b/.github/workflows/publish.yml @@ -5,12 +5,15 @@ on: types: [published] workflow_dispatch: -permissions: - contents: write - jobs: publish: runs-on: ubuntu-latest + permissions: + # Required for PyPI Trusted Publishing (OIDC). No API token needed: + # https://docs.pypi.org/trusted-publishers/ + id-token: write + # Required for mike to push the docs to the gh-pages branch. + contents: write steps: - name: Checkout uses: actions/checkout@v7 @@ -19,9 +22,9 @@ jobs: - name: Extract version from tag run: | - # Removes 'v' prefix from tag (e.g., v1.0.0 -> 1.0.0) + # Removes 'v' prefix from tag (e.g. v1.0.0 -> 1.0.0) VERSION=${GITHUB_REF_NAME#v} - echo "PACKAGE_VERSION=$VERSION" >> $GITHUB_ENV + echo "PACKAGE_VERSION=$VERSION" >> "$GITHUB_ENV" echo "Extracted version from tag: $VERSION" - name: Check package version is PEP440 compliant @@ -29,28 +32,28 @@ jobs: # patch, but not any optional suffixes. run: echo "${{ env.PACKAGE_VERSION }}" | grep -P "^\d+\.\d+\.\d+.*$" - - name: Setup Python 3.11 - uses: actions/setup-python@v6 + - name: Install uv + uses: astral-sh/setup-uv@v6 with: - python-version: '3.11' + enable-cache: true + cache-python: true - - name: Install pypa/build and build - run: | - pip install build - python -m build --sdist --wheel --outdir dist/ . + - name: Build sdist and wheel + run: uv build - name: Publish to PyPI if: startsWith(github.ref, 'refs/tags') + # Trusted Publishing: configure a pending publisher on PyPI pointing at + # this workflow. Falls back to a token via `with: password: ...`. uses: pypa/gh-action-pypi-publish@release/v1 - with: - password: ${{ secrets.PYPI_TOKEN }} - name: Configure git run: | git config --local user.name "GitHub Actions Bot" git config --local user.email "41898282+github-actions[bot]@users.noreply.github.com" + - name: Deploy docs for release version to gh-pages branch if: startsWith(github.ref, 'refs/tags/') run: | - pip install .[docs] - mike deploy --push --update-aliases "${{ env.PACKAGE_VERSION }}" latest + uv sync --group docs + uv run mike deploy --push --update-aliases "${{ env.PACKAGE_VERSION }}" latest diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index cfb6721..742b954 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -7,11 +7,15 @@ on: pull_request: workflow_dispatch: +permissions: + contents: read + jobs: tests: timeout-minutes: 10 strategy: + fail-fast: false matrix: include: - os: ubuntu-latest @@ -32,26 +36,16 @@ jobs: - name: Checkout uses: actions/checkout@v7 - - name: Set up Python ${{matrix.python}} - uses: actions/setup-python@v6 + - name: Install uv + uses: astral-sh/setup-uv@v6 with: + enable-cache: true + # Cache the interpreter download in addition to the package cache. + cache-python: true + # Sets UV_PYTHON, which takes precedence over .python-version. This + # keeps the tox driver environment on the same interpreter as the + # environment under test, so each job provisions only one Python. python-version: ${{ matrix.python }} - - name: Get pip cache dir - id: pip-cache-dir - run: echo "PIP_CACHE_DIR=$(pip cache dir)" >> $GITHUB_ENV - - - name: Use pip cache - id: pip-cache - uses: actions/cache@v6 - with: - path: ${{ env.PIP_CACHE_DIR }} - key: tests-${{ matrix.os }}-pip-${{ matrix.python }}-${{ hashFiles('pyproject.toml') }} - restore-keys: | - tests-${{ matrix.os }}-pip-${{ matrix.python }}- - - - name: Install Packages - run: python -mpip install --upgrade pip tox - - - name: Run Tox - run: tox -e ${{ matrix.toxenv }} + - name: Run tox + run: uv run tox -e ${{ matrix.toxenv }} diff --git a/.gitignore b/.gitignore index b6e4761..fe0aa48 100644 --- a/.gitignore +++ b/.gitignore @@ -2,128 +2,59 @@ __pycache__/ *.py[cod] *$py.class - -# C extensions *.so # Distribution / packaging .Python build/ -develop-eggs/ dist/ downloads/ -eggs/ -.eggs/ -lib/ -lib64/ -parts/ -sdist/ -var/ wheels/ -pip-wheel-metadata/ -share/python-wheels/ *.egg-info/ -.installed.cfg *.egg -MANIFEST - -# PyInstaller -# Usually these files are written by a python script from a template -# before PyInstaller builds the exe, so as to inject date/other infos into it. -*.manifest -*.spec - -# Installer logs -pip-log.txt -pip-delete-this-directory.txt +_version.py # Unit test / coverage reports -htmlcov/ .tox/ .nox/ .coverage .coverage.* -.cache -nosetests.xml coverage.xml -*.cover -*.py,cover -.hypothesis/ +htmlcov/ +.cache .pytest_cache/ +.hypothesis/ -# Translations -*.mo -*.pot - -# Django stuff: -*.log -local_settings.py -db.sqlite3 -db.sqlite3-journal - -# Flask stuff: -instance/ -.webassets-cache - -# Scrapy stuff: -.scrapy - -# Sphinx documentation -docs/_build/ - -# PyBuilder -target/ - -# Jupyter Notebook -.ipynb_checkpoints - -# IPython -profile_default/ -ipython_config.py - -# pyenv -.python-version - -# pipenv -# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control. -# However, in case of collaboration, if having platform-specific dependencies or dependencies -# having no cross-platform support, pipenv may install dependencies that don't work, or not -# install all needed dependencies. -#Pipfile.lock - -# PEP 582; used by e.g. github.com/David-OConnor/pyflow -__pypackages__/ - -# Celery stuff -celerybeat-schedule -celerybeat.pid - -# SageMath parsed files -*.sage.py +# Type checkers / linters +.complexipy_cache/ +.mypy_cache/ +.dmypy.json +.pyre/ +.pytype/ +.ruff_cache/ +.complexipy_cache/ # Environments +# Note: uv.lock IS committed (it pins a reproducible dev environment). .env -.venv +.venv/ env/ venv/ ENV/ -env.bak/ -venv.bak/ -# Spyder project settings -.spyderproject -.spyproject +# uv creates virtual envs and caches here by default +.uv/ -# Rope project settings -.ropeproject +# Jupyter / IPython +.ipynb_checkpoints +profile_default/ +ipython_config.py -# mkdocs documentation +# MkDocs build output /site -# mypy -.mypy_cache/ -.dmypy.json -dmypy.json - -# Pyre type checker -.pyre/ +# Editor / OS cruft +.idea/ +.vscode/ +*.swp +.DS_Store diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 1cd4f2d..89f52fa 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,32 +1,63 @@ +# Managed with prek (https://github.com/j178/prek), a fast drop-in replacement +# for pre-commit that reads this same config file. Install the git hooks with +# `prek install` and run against everything with `prek run --all-files`. +# +# The `ci:` block below is only consumed by https://pre-commit.ci. prek ignores +# it. Autoupdates are handled by the prek-autoupdate GitHub Actions workflow. ci: autofix_prs: false + repos: - - repo: 'https://github.com/pre-commit/pre-commit-hooks' + - repo: https://github.com/pre-commit/pre-commit-hooks rev: v6.0.0 hooks: - id: mixed-line-ending + args: [--fix=lf] - id: trailing-whitespace - id: end-of-file-fixer - id: check-added-large-files + - id: check-case-conflict - id: check-docstring-first - id: check-json + - id: check-toml - id: check-yaml - id: check-merge-conflict + - id: debug-statements - id: name-tests-test - - repo: 'https://github.com/codespell-project/codespell' - rev: v2.4.2 + # Uncomment to forbid blanket `# noqa` / `# type: ignore` comments: + # - id: python-check-blanket-noqa + # - id: python-check-blanket-type-ignore + + # Spell checker. Replaces codespell; faster and lower false-positive rate. + - repo: https://github.com/crate-ci/typos + rev: v1.48.0 hooks: - - id: codespell - - repo: 'https://github.com/astral-sh/ruff-pre-commit' - rev: v0.15.21 + - id: typos + + - repo: https://github.com/astral-sh/ruff-pre-commit + rev: v0.15.22 hooks: - id: ruff-check - args: - - '--fix' - - '--exit-non-zero-on-fix' + args: [--fix, --exit-non-zero-on-fix] - id: ruff-format - - repo: 'https://github.com/pre-commit/mirrors-mypy' - rev: v2.3.0 + + # Cognitive-complexity gate. Complements Ruff (whose overlapping complexity + # rules are disabled in pyproject.toml). + - repo: https://github.com/rohaquinlop/complexipy-pre-commit + rev: v5.1.0 + hooks: + - id: complexipy + + # mypy runs in the project's uv environment so it type-checks against the + # real (locked) dependencies and the strict config in pyproject.toml. + # Keep the `uv run` prefix here: git hooks are invoked without an activated + # virtualenv, so a bare `mypy` would not resolve. + - repo: local hooks: - id: mypy - additional_dependencies: [] + name: mypy + entry: uv run mypy . + language: system + types: [python] + pass_filenames: false + require_serial: true diff --git a/.python-version b/.python-version new file mode 100644 index 0000000..24ee5b1 --- /dev/null +++ b/.python-version @@ -0,0 +1 @@ +3.13 diff --git a/AGENTS.md b/AGENTS.md new file mode 100644 index 0000000..f753cb7 --- /dev/null +++ b/AGENTS.md @@ -0,0 +1,65 @@ +# Agent Instructions + +Baseline guidance for AI coding agents working in this repository. Humans should +read the docs under `docs/contributing/`; this file is the concise, agent-facing +summary. `CLAUDE.md` imports this file so there is a single source of truth. + +## Repository Layout + +- `pypkg/` — the package source (flat layout, **no** `src/`). Avoid writing + logic in `__init__.py`. +- `tests/` — pytest tests. Mirror the package layout; test files end in + `_test.py` (e.g. `pypkg/x/y.py` → `tests/x/y_test.py`). +- `testing/` — shared helpers/fixtures for tests (not tests themselves). +- `docs/` — MkDocs sources. `docs/generate_api.py` auto-generates API pages, so + do not hand-write `docs/api/`. +- `.github/workflows/` — CI (tests, prek, docs, publish). + +`pypkg`, `pypkg-author`, and `gpauloski/python-template` are template +placeholders; in a real project they will be replaced with the actual names. + +## Environment & Commands + +This project uses [uv](https://docs.astral.sh/uv/). Create the environment and +activate it once, then invoke tools directly. + +```bash +uv sync # install project + dev group +source .venv/bin/activate # Windows: .venv\Scripts\activate +``` + +```bash +uv sync --group docs # add docs dependencies +pytest # run tests +pytest tests/x/y_test.py::test_z # run one test +prek run --all-files # run all hooks (lint/format/type/spell) +mypy . # type check +tox # full matrix (py3.10-3.13, prek, docs) +tox -e py313 # a single environment +uv build # build sdist + wheel +``` + +If the environment is not activated, prefix a command with `uv run` (e.g. +`uv run pytest`) to run it inside the managed environment. + +Before finishing a change, ensure `prek run --all-files` and `pytest` both pass. + +## Conventions + +- **Every module** starts with `from __future__ import annotations` (enforced by + Ruff isort). Fully type-annotate package code — mypy runs in **strict** mode. +- Formatting/linting is **Ruff with `ALL` rules enabled** (see `pyproject.toml` + for the commented ignores). Style: single quotes, 79-char lines, Google-style + docstrings. Do not fight the formatter. +- Spell checking is **typos**; complexity is gated by **complexipy**. +- Tests use `assert` and may omit docstrings/annotations (relaxed via per-file + ignores). Put reusable test code in `testing/`, not `tests/`. +- Prefer pure functions; document all raised exceptions in docstrings. See + `docs/contributing/style-guide.md` for the full style guide. + +## Skills + +Project skills live in `.claude/skills/`. Available skills: `check` (run the +full local gate), `release` (cut a release), `rename-template` (replace the +`pypkg` placeholders), and `add-docs-page` (scaffold a docs page). Skills are +optional helpers — the commands above are always the source of truth. diff --git a/CLAUDE.md b/CLAUDE.md new file mode 100644 index 0000000..2228dc9 --- /dev/null +++ b/CLAUDE.md @@ -0,0 +1,6 @@ +# Claude Code Instructions + +The agent instructions for this repository live in `AGENTS.md` to avoid +duplication. They are imported below. + +@AGENTS.md diff --git a/LICENSE b/LICENSE index 7b7753f..781e600 100644 --- a/LICENSE +++ b/LICENSE @@ -1,4 +1,4 @@ -Copyright (c) 2023-Present FooBar Author +Copyright (c) 2023-Present pypkg-author Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal diff --git a/README.md b/README.md index a101020..817a49e 100644 --- a/README.md +++ b/README.md @@ -2,66 +2,109 @@ [![docs](https://github.com/gpauloski/python-template/actions/workflows/docs.yml/badge.svg)](https://github.com/gpauloski/python-template/actions) [![tests](https://github.com/gpauloski/python-template/actions/workflows/tests.yml/badge.svg)](https://github.com/gpauloski/python-template/actions) -[![pre-commit.ci status](https://results.pre-commit.ci/badge/github/gpauloski/python-template/main.svg)](https://results.pre-commit.ci/latest/github/gpauloski/python-template/main) - -Python package template repo that provides: -- Package, examples, and testing layout. -- GitHub PR and Issue templates. -- Example docs with MKDocs and GitHub Pages. -- CI framework with `pre-commit` and `tox`. -- GitHub actions for running tests and publishing packages. - -This package setup was based on [Anthony Sottile's project setup](https://www.youtube.com/watch?v=q8DkatMZvUs&list=PLWBKAf81pmOaP9naRiNAqug6EBnkPakvY) but deviates in some places (e.g., `pyproject.toml` and `ruff`). - -## Setup Instructions - -1. Click the "Use this template" button at the top right of this page. -2. Delete and directories you will not be using (commonly `docs/` if you do not want to use MKDocs or `examples/` if you will not have example code). -3. Follow the instructions to create the new repo then clone your repo locally. -4. The template uses "foobar" to indicate things that need to be changed. - Start by searching for all instances (`git grep foobar`) and changing them accordingly. -5. Configure pre-commit: - - Go to [https://pre-commit.ci/](https://pre-commit.ci/) and enable pre-commit on your repo. - - Update the pre-commit badge URL in this README with your new badge URL. -6. Configure GitHub pages: - - Go to the "Pages" section of your repository settings. - - Select "Deploy from a branch" and use the "gh-pages" branch. -7. Configure PyPI releases (if relevant): - - Create a new API token for [https://pypi.org/](https://pypi.org/). - - Add the token as a GitHub actions secret (see the instructions [here](https://github.com/pypa/gh-action-pypi-publish)). -8. Delete this boilerplate stuff in the README. -9. Commit and push changes. - -### GitHub Configuration - -I recommend making a few other changes to the repo's setting on GitHub. -- In "General" - - Select/deselect features you need/don't need. - - Select "Automatically delete head branches -- In "Branches": enable branch protection on `main`. - - Check "Require a pull request before merging" - - Check "Require status checks to pass before merging" - - Check "Require branches to be up to date before merging" - - Set required checks (e.g., pre-commit.ci, tests, etc.) - - Check "Do not allow bypassing the above settings" +[![prek](https://github.com/gpauloski/python-template/actions/workflows/prek.yml/badge.svg)](https://github.com/gpauloski/python-template/actions) -## Installation +An opinionated, modern Python package template that provides: -Install via pip: -``` -$ pip install foobar +- A flat package layout with a `testing/` helpers package. +- [uv](https://docs.astral.sh/uv/) for dependency management and environments. +- Strict linting/formatting ([Ruff](https://docs.astral.sh/ruff/)), type + checking ([mypy](https://mypy.readthedocs.io/) strict), and spell checking + ([typos](https://github.com/crate-ci/typos)). +- [prek](https://github.com/j178/prek) (a fast pre-commit replacement) and + [tox](https://tox.wiki/) for local and CI checks. +- GitHub Actions for tests, docs, and publishing (PyPI Trusted Publishing). +- Docs with [MkDocs](https://www.mkdocs.org/) + Material and GitHub Pages. +- PR/issue templates and agent instructions (`AGENTS.md`/`CLAUDE.md`). + +The original layout was inspired by +[Anthony Sottile's project setup](https://www.youtube.com/watch?v=q8DkatMZvUs&list=PLWBKAf81pmOaP9naRiNAqug6EBnkPakvY), +but this template has since diverged significantly. + +## Creating a New Project + +You can either start from this template or scaffold from scratch with uv. + +**Option A — Use this template (recommended).** + +1. Click **"Use this template"** at the top right of the repo. +2. Clone your new repo locally. +3. Delete directories you will not use (e.g. `docs/` if you do not want MkDocs). +4. The template uses `pypkg` as a placeholder. Find and replace every instance: + ```bash + git grep -l pypkg # review the matches + ``` + Rename the `pypkg/` package directory and update `pypkg`, `pypkg-author`, + and `gpauloski/python-template` throughout (`pyproject.toml`, `mkdocs.yml`, + docs, workflows, etc.). +5. Update author, description, and URLs in `pyproject.toml`. +6. Configure the repository (see [Repository Setup](#repository-setup)). + +**Option B — Start fresh with uv.** + +Run `uv init --lib ` to scaffold a new library, then copy the tooling +config from this template (`pyproject.toml` tool sections, `.pre-commit-config.yaml`, +`tox.ini`, `.github/`, and the agent files). Note that `uv init --lib` uses a +`src/` layout; this template uses a flat layout, so move the package up a level +if you want to match it. + +## Development + +This project uses [uv](https://docs.astral.sh/uv/). Install it first +(see the [uv install docs](https://docs.astral.sh/uv/getting-started/installation/)): + +```bash +curl -LsSf https://astral.sh/uv/install.sh | sh ``` -For local development: +Then create the environment, activate it, and install the git hooks: + +```bash +uv sync # create .venv and install the project + dev tools +source .venv/bin/activate # Windows: .venv\Scripts\activate +prek install # install the git pre-commit hooks ``` -$ tox --devenv venv -e py310 -$ pre-commit install + +With the environment activated, run tools directly: + +```bash +pytest # run the tests +prek run --all-files # run all lint/format/type/spell checks +mypy . # type check +tox # full matrix: py3.10-3.13, prek, docs +tox -e py313 # a single environment +mkdocs serve # preview docs locally (needs the docs group) ``` -or + +Install the docs dependency group when working on documentation: + +```bash +uv sync --group docs ``` -$ pip install -e . + +If you would rather not activate the environment, prefix any command with +`uv run` (e.g. `uv run pytest`) to run it inside the managed environment. + +## Installation + +Install the released package via pip: + +```bash +pip install pypkg ``` -## Additional README Sections +## Repository Setup + +After creating your repository from the template, configure GitHub: + +- **General:** enable "Automatically delete head branches" and prefer + "Squash merging". +- **Branches:** add a branch protection (or ruleset) for `main` requiring a PR + and passing status checks (`tests`, `prek`, `check-docs`). +- **Pages:** deploy from the `gh-pages` branch (created by the docs workflow). +- **PyPI:** configure [Trusted Publishing](https://docs.pypi.org/trusted-publishers/) + pointing at the `publish` workflow (no API token required). -... +See `docs/contributing/repository-setup.md` for the full checklist, including +recommended issue labels that align with the release-notes categories, and +`docs/contributing/releases.md` for how to cut a release. diff --git a/docs/contributing/index.md b/docs/contributing/index.md index 6ec3975..506e2d3 100644 --- a/docs/contributing/index.md +++ b/docs/contributing/index.md @@ -1,56 +1,50 @@ ## Getting Started for Local Development -We recommend using [Tox](https://tox.wiki/en/latest/index.html){target=_blank} -to setup the development environment. This will create a new virtual -environment with all of the required packages installed -and FooBar installed in editable mode with the necessary extras options. +pypkg uses [uv](https://docs.astral.sh/uv/){target=_blank} to manage the +development environment. First +[install uv](https://docs.astral.sh/uv/getting-started/installation/){target=_blank}, +then clone the repository and sync the environment. ```bash -$ git clone https://github.com/foobar-author/foobar -$ cd foobar -$ tox --devenv venv -e py310 -$ . venv/bin/activate +$ git clone https://github.com/pypkg-author/pypkg +$ cd pypkg +$ uv sync # creates .venv with the project + dev dependencies +$ source .venv/bin/activate # Windows: .venv\Scripts\activate +$ prek install # install the git pre-commit hooks ``` -!!! warning +`uv sync` installs the `dev` dependency group by default. Add the docs group +when working on documentation with `#!bash $ uv sync --group docs`. - Running Tox in a Conda environment is possible but it may conflict with - Tox's ability to find the correct Python versions. E.g., if your - Conda environment is Python 3.13, running `#!bash $ tox -e p312` may still use - Python 3.13. - -To install manually: -```bash -$ git clone https://github.com/foobar-author/foobar -$ cd foobar -$ python -m venv venv -$ . venv/bin/activate -$ pip install -e .[dev,docs] -``` +Activating the environment lets you invoke tools directly (`#!bash $ pytest`, +`#!bash $ tox`, ...). If you prefer not to activate it, prefix commands with +`#!bash $ uv run` instead. ## Continuous Integration -FooBar uses [pre-commit](https://pre-commit.com/){target=_blank} and -[Tox](https://tox.wiki/en/latest/index.html){target=_blank} for continuous integration -(test, linting, etc.). +pypkg uses [prek](https://github.com/j178/prek){target=_blank} (a drop-in +replacement for pre-commit) and +[Tox](https://tox.wiki/en/latest/index.html){target=_blank} for continuous +integration (tests, linting, type checking, etc.). -### Linting and Type Checking (pre-commit) +### Linting and Type Checking (prek) -To use pre-commit, install the hook and then run against files. +The hooks (Ruff, mypy, typos, complexipy, and more) are configured in +`.pre-commit-config.yaml`. Run them against all files with: ```bash -$ pre-commit install -$ pre-commit run --all-files +$ prek run --all-files ``` ### Tests (tox) -The entire CI workflow can be run with `#!bash $ tox`. -This will test against multiple versions of Python and can be slow. +Tox environments run with uv via `tox-uv`. The entire CI workflow can be run +with `#!bash $ tox`; this tests against multiple versions of Python and +can be slow. -Module-level unit-test are located in the `tests/` directory and its -structure is intended to match that of `foobar/`. -E.g. the tests for `foobar/x/y.py` are located in +Module-level unit tests are located in the `tests/` directory and its +structure is intended to match that of `pypkg/`. +E.g. the tests for `pypkg/x/y.py` are located in `tests/x/y_test.py`; however, additional test files can be added as needed. Tests should be narrowly focused and target a single aspect of the code's functionality, tests should not test internal implementation details of @@ -60,21 +54,23 @@ Code that is useful for building tests but is not a test itself belongs in the `testing/` directory. ```bash -# Run all tests in tests/ +# Run all tests in a single environment $ tox -e py313 # Run a specific test $ tox -e py313 -- tests/x/y_test.py::test_z +# Or run pytest directly in the current environment +$ pytest tests/x/y_test.py::test_z ``` ## Docs If code changes require an update to the documentation (e.g., for function signature changes, new modules, etc.), the documentation can be built using -MKDocs. +MkDocs. ```bash -# Manually -$ pip install -e .[docs] +# Manually (install the docs dependency group first) +$ uv sync --group docs $ mkdocs build --strict # Build only to site/index.html $ mkdocs serve # Serve locally diff --git a/docs/contributing/issues-pull-requests.md b/docs/contributing/issues-pull-requests.md index 27248c9..25fa869 100644 --- a/docs/contributing/issues-pull-requests.md +++ b/docs/contributing/issues-pull-requests.md @@ -1,6 +1,6 @@ ## Issues -[Issue Tracker](https://github.com/foobar-author/foobar/issues){target=_blank} +[Issue Tracker](https://github.com/pypkg-author/pypkg/issues){target=_blank} We use GitHub issues to report problems, request and track changes, and discuss future ideas. diff --git a/docs/contributing/releases.md b/docs/contributing/releases.md index 45dd373..207067a 100644 --- a/docs/contributing/releases.md +++ b/docs/contributing/releases.md @@ -1,7 +1,7 @@ ## Release Timeline Releases are created on an as-needed basis. -Milestones are the [Issue Tracker](https://github.com/foobar-author/foobar/issues){target=_blank} are used to track features to be included in upcoming releases. +Milestones are the [Issue Tracker](https://github.com/pypkg-author/pypkg/issues){target=_blank} are used to track features to be included in upcoming releases. ## Creating Releases @@ -12,19 +12,22 @@ Milestones are the [Issue Tracker](https://github.com/foobar-author/foobar/issue start at 0 and pre-release/post-release/dev-release segments start at 1. 1. Tag the release commit and push. ```bash - $ git tag -s v{VERSION} -m "FooBar v{VERSION}" + $ git tag -s v{VERSION} -m "pypkg v{VERSION}" $ git push origin v{VERSION} ``` Note the version number is prepended by "v" for the tags so tooling can distinguish release tags from non-release tags. 5. Create a new release on GitHub using the tag. The title should be - `FooBar v{VERSION}`. + `pypkg v{VERSION}`. Publishing the release triggers the `publish` workflow, + which builds the package and uploads it to PyPI via Trusted Publishing (no + token required) and deploys the versioned docs. See + [Repository Setup](repository-setup.md) for the one-time PyPI configuration. 6. **Official release:** 1. Use the "Generate release notes" option and set the previous tag as the previous official release tag. E.g., for `v0.4.1`, the previous release tag should be `v0.4.0` and NOT `v0.4.1a1`. 2. Add an "Upgrade Steps" section at the top (see previous releases for examples). 3. Review the generated notes and edit as needed. PRs are organized by tag, but some PRs will be missing tags and need to be moved from the "Other Changes" section to the correct section. 4. Select "Set as the latest release." 7. **Unofficial release:** (alpha/dev builds) - 1. Do NOT generate release notes. The body can be along the lines of "Development pre-prelease for `V{VERSION}`." + 1. Do NOT generate release notes. The body can be along the lines of "Development pre-prerelease for `V{VERSION}`." 2. Leave the previous tag as "auto." 3. Select "Set as a pre-release." diff --git a/docs/contributing/repository-setup.md b/docs/contributing/repository-setup.md new file mode 100644 index 0000000..ef0ff0e --- /dev/null +++ b/docs/contributing/repository-setup.md @@ -0,0 +1,54 @@ +This guide covers the one-time GitHub configuration for a repository created +from this template. + +## Recommended Repository Defaults + +In your repository **Settings**: + +- **General → Pull Requests:** + - Prefer **Squash merging** (and consider disabling merge commits) to keep a + linear history where one PR maps to one commit. + - Enable **Automatically delete head branches** to clean up merged branches. +- **Branches → Add branch ruleset (or protection) for `main`:** + - Require a pull request before merging. + - Require status checks to pass before merging, and require branches to be + up to date. Select the checks you want to enforce (e.g. `tests`, `prek`, + `check-docs`). + - Do not allow bypassing the above settings. +- **Pages:** once the `docs` workflow has run and created the `gh-pages` + branch, set Pages to deploy from that branch. +- **Actions → General:** allow the workflow permissions the template needs + (the workflows request least-privilege permissions per job). + +## PyPI Trusted Publishing + +The `publish` workflow uses +[PyPI Trusted Publishing](https://docs.pypi.org/trusted-publishers/){target=_blank} +(OIDC), so no API token secret is required. Configure a +[pending publisher](https://docs.pypi.org/trusted-publishers/creating-a-project-through-oidc/){target=_blank} +on PyPI that points at this repository, the `publish.yml` workflow, and the +`release` environment (if you use one). + +## Issue and Pull Request Labels + +Release notes are generated automatically from PR labels (see +`.github/release.yml`). Create the following labels so the generated changelog +is organized correctly: + +| Label | Purpose | Suggested color | +| --- | --- | --- | +| `breaking` | Backwards-incompatible changes | `#b60205` | +| `enhancement` | New features | `#0e8a16` | +| `bug` | Bug fixes | `#d73a4a` | +| `refactor` | Internal changes / improvements | `#fbca04` | +| `documentation` | Documentation-only changes | `#0075ca` | +| `dependencies` | Dependency updates | `#c5def5` | +| `ignore-for-release` | Excluded from release notes | `#ededed` | + +Every PR should carry at least one of these labels; unlabeled PRs fall into the +"Other Changes" section of the release notes. You can create them quickly with +the [GitHub CLI](https://cli.github.com/){target=_blank}, e.g.: + +```bash +$ gh label create breaking --color b60205 --description "Breaking change" +``` diff --git a/docs/examples.md b/docs/examples.md index 4793c2a..97c3728 100644 --- a/docs/examples.md +++ b/docs/examples.md @@ -1,11 +1,11 @@ # Examples -## foobar +## pypkg -foobar can be used as follows. +pypkg can be used as follows. ```python -from foobar import foo +from pypkg import foo foo.bar([1, 2, 3]) # output: 6 diff --git a/docs/generate_api.py b/docs/generate_api.py index 362ea1c..5436183 100644 --- a/docs/generate_api.py +++ b/docs/generate_api.py @@ -8,7 +8,7 @@ nav = mkdocs_gen_files.Nav() -PACKAGE_DIR = 'foobar/' +PACKAGE_DIR = 'pypkg/' for path in sorted(Path(PACKAGE_DIR).rglob('**/*.py')): module_path = path.with_suffix('') diff --git a/docs/get-started.md b/docs/get-started.md index 7248f9c..251a830 100644 --- a/docs/get-started.md +++ b/docs/get-started.md @@ -1,19 +1,19 @@ # Quick Start -foobar brief description. +pypkg brief description. ## Overview -foobar detailed overview. +pypkg detailed overview. ## Installation ```bash -$ pip install foobar +$ pip install pypkg ``` Documentation on installing for local development is provided in [Contributing](contributing/index.md). ## Usage -foobar usage example. +pypkg usage example. diff --git a/docs/installation.md b/docs/installation.md index 9ffd745..ef12557 100644 --- a/docs/installation.md +++ b/docs/installation.md @@ -1,5 +1,5 @@ # Installation ```bash -$ pip install foobar +$ pip install pypkg ``` diff --git a/docs/templates/python/material/module.html.jinja b/docs/templates/python/material/module.html.jinja index 78a24ec..5d129c9 100644 --- a/docs/templates/python/material/module.html.jinja +++ b/docs/templates/python/material/module.html.jinja @@ -4,7 +4,7 @@ - + {{ module.relative_package_filepath }} diff --git a/examples/README.md b/examples/README.md deleted file mode 100644 index 0a01927..0000000 --- a/examples/README.md +++ /dev/null @@ -1 +0,0 @@ -# foobar Examples diff --git a/examples/example.py b/examples/example.py deleted file mode 100644 index 2691305..0000000 --- a/examples/example.py +++ /dev/null @@ -1,32 +0,0 @@ -"""Example script that uses the foobar package.""" - -from __future__ import annotations - -import argparse - -from foobar.foo import bar - - -def main() -> int: - """Script entry point.""" - parser = argparse.ArgumentParser() - parser.add_argument( - '-n', - '--numbers', - nargs='+', - type=int, - default=None, - help='List of integers to sum', - ) - args = parser.parse_args() - - result = bar(args.numbers) - - print(f'Input: {args.numbers}') - print(f'Result: {result}') - - return 0 - - -if __name__ == '__main__': - raise SystemExit(main()) diff --git a/mkdocs.yml b/mkdocs.yml index 1138491..2ed6006 100644 --- a/mkdocs.yml +++ b/mkdocs.yml @@ -1,12 +1,12 @@ site_name: Python Template site_url: https://gpauloski.github.io/python-template -site_author: FooBar Author -site_description: Documentation for FooBar. +site_author: pypkg-author +site_description: Documentation for pypkg. repo_name: gpauloski/python-template repo_url: https://github.com/gpauloski/python-template -copyright: Copyright © 2023—Present FooBar Authors +copyright: Copyright © 2023—Present pypkg-author theme: name: material @@ -61,7 +61,7 @@ watch: - mkdocs.yml - README.md - docs/ - - foobar/ + - pypkg/ extra: version: @@ -90,8 +90,8 @@ markdown_extensions: - pymdownx.keys - pymdownx.magiclink: repo_url_shorthand: true - user: foobar-author - repo: foobar + user: pypkg-author + repo: pypkg - pymdownx.mark - pymdownx.smartsymbols - pymdownx.snippets: @@ -118,6 +118,7 @@ nav: - contributing/index.md - Style Guide: contributing/style-guide.md - Issues and Pull Requests: contributing/issues-pull-requests.md + - Repository Setup: contributing/repository-setup.md - Releases: contributing/releases.md plugins: @@ -134,10 +135,7 @@ plugins: enable_inventory: true handlers: python: - setup_commands: - - import pytkdocs_tweaks - - pytkdocs_tweaks.main() - import: + inventories: - https://docs.python.org/3/objects.inv options: annotations_path: brief diff --git a/foobar/__init__.py b/pypkg/__init__.py similarity index 73% rename from foobar/__init__.py rename to pypkg/__init__.py index f3d2bdf..b278be3 100644 --- a/foobar/__init__.py +++ b/pypkg/__init__.py @@ -1,10 +1,9 @@ -"""foobar package.""" +"""pypkg package.""" # It is recommended to not write code in the __init__.py because it is easy # to introduce import cycles and code becomes harder to search for. from __future__ import annotations import importlib.metadata as importlib_metadata -import sys -__version__ = importlib_metadata.version('foobar') +__version__ = importlib_metadata.version('pypkg') diff --git a/foobar/foo.py b/pypkg/foo.py similarity index 100% rename from foobar/foo.py rename to pypkg/foo.py diff --git a/foobar/py.typed b/pypkg/py.typed similarity index 100% rename from foobar/py.typed rename to pypkg/py.typed diff --git a/pyproject.toml b/pyproject.toml index b3e8266..e834513 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -3,14 +3,15 @@ requires = ["setuptools>=77.0", "setuptools_scm"] build-backend = "setuptools.build_meta" [project] -name = "foobar" +name = "pypkg" authors = [ - {name = "foobar author", email = "foobar@foobar.com"}, + {name = "pypkg-author", email = "pypkg-author@example.com"}, ] -description = "Foobar example package" +description = "pypkg example package" dynamic = ["version"] readme = "README.md" requires-python = ">=3.10" +keywords = ["pypkg"] license = "MIT" license-files = ["LICENSE"] classifiers = [ @@ -23,69 +24,61 @@ dependencies = [ ] [project.urls] -Homepage = "https://github.com/foobar-author/foobar" -Documentation = "https://foobar.readthedocs.io" -Source = "https://github.com/foobar-author/foobar" - -[project.optional-dependencies] +Homepage = "https://github.com/pypkg-author/pypkg" +Documentation = "https://pypkg.readthedocs.io" +Source = "https://github.com/pypkg-author/pypkg" + +# Development tooling lives in PEP 735 dependency groups rather than +# optional-dependencies. uv installs the `dev` group by default (`uv sync`), +# and tox pulls groups in per-environment. Install a group explicitly with +# `uv sync --group docs`. See https://peps.python.org/pep-0735/. +[dependency-groups] dev = [ "covdefaults>=2.2", "coverage", "mypy", - "pre-commit", + "prek", "pytest", "pytest-cov", "ruff>=0.2.0", - "tox", - "virtualenv", + "tox>=4.22", + "tox-uv-bare", ] +# Lower bounds only; exact versions are pinned in uv.lock for reproducibility. docs = [ - "black==24.4.2", - "mkdocs-autorefs==1.3.1", - "mkdocs-click==0.8.1", - "mkdocs-gen-files==0.5.0", - "mkdocs-literate-nav==0.6.1", - "mkdocs-material==9.5.32", - "mkdocs-section-index==0.3.9", - "mkdocstrings==0.25.2", - "mkdocstrings-python==1.10.8", - "mike==2.1.3", + # black is used by mkdocstrings-python to format rendered signatures. + "black>=24", + "mkdocs-autorefs>=1.3", + "mkdocs-click>=0.8", + "mkdocs-gen-files>=0.5", + "mkdocs-literate-nav>=0.6", + "mkdocs-material>=9.5", + "mkdocs-section-index>=0.3", + "mkdocstrings>=0.25", + "mkdocstrings-python>=1.10", + "mike>=2.1", ] -[tool.codespell] -skip = """ -.git, -.github, -__pycache__, -build, -dist, -.*egg-info -""" - [tool.coverage.run] plugins = ["covdefaults"] -omit = ["examples"] [tool.mypy] python_version = "3.10" -check_untyped_defs = true -disallow_any_generics = true -disallow_incomplete_defs = true -disallow_untyped_defs = true -no_implicit_optional = true -warn_redundant_casts = true -warn_unused_configs = true -warn_unused_ignores = true - -[[tool.mypy.overrides]] -module = "testing.*" -allow_incomplete_defs = true -allow_untyped_defs = true +# Strict mode turns on the full suite of type-checking flags (disallow untyped +# defs, warn on Any, etc.). See https://mypy.readthedocs.io/en/stable/config_file.html. +strict = true +# Docs helper scripts (e.g. docs/generate_api.py) import mkdocs plugins that are +# only present in the `docs` dependency group, so exclude them from type checks. +# Also exclude build artifacts so a local `mkdocs build` (site/) does not break +# `mypy .`. +exclude = ["^docs/", "^site/", "^build/", "^dist/"] [[tool.mypy.overrides]] -module = "tests.*" +# Test code may use untyped defs and untyped decorators (e.g. parametrize). +module = ["testing.*", "tests.*"] allow_incomplete_defs = true allow_untyped_defs = true +disallow_untyped_decorators = false [tool.ruff] line-length = 79 @@ -94,50 +87,29 @@ target-version = "py310" [tool.ruff.format] indent-style = "space" quote-style = "single" +line-ending = "lf" [tool.ruff.lint] -# See all rules here: https://beta.ruff.rs/docs/rules -select = [ - # pyflakes - "F", - # pycodestyle - "E", - # mccabe - "C90", - # isort - "I", - # pep8-naming - "N", - # pydocstyle - "D", - # pyupgrade - "UP", - # flake8-2020 - "YTT", - # flake8-bugbear - "B", - # flake8-builtins - "A", - # flake8-commas - "COM", - # flake8-comprehensions - "C4", - # flake8-implicit-str-concat - "ISC", - # flake8-pytest-style - "PT", - # flake8-quotes - "Q", - # flake8-debugger - "T10", - # flake8-simplify - "SIM", - # PyLint - "PL", - # ruff-specific - "RUF", +# Enable every lint rule by default, then opt out below. This is intentionally +# strict: new rules are picked up automatically on upgrade. See all rules at +# https://docs.astral.sh/ruff/rules/. +select = ["ALL"] +ignore = [ + # The following conflict with the Ruff formatter and must stay disabled: + # https://docs.astral.sh/ruff/formatter/#conflicting-lint-rules + "COM812", # missing-trailing-comma (handled by the formatter) + "ISC001", # single-line-implicit-string-concatenation + # Redundant/mutually-exclusive pydocstyle rules. We use the Google + # convention (set below), which is incompatible with these: + "D203", # one-blank-line-before-class (conflicts with D211) + "D213", # multi-line-summary-second-line (conflicts with D212) + # Do not require a copyright notice at the top of every file. + "CPY001", + # Code complexity is enforced by the complexipy pre-commit hook (cognitive + # complexity), so disable Ruff's overlapping complexity checks. + "C901", # mccabe complex-structure + "PLR0912", # too-many-branches ] -extend-ignore = [] [tool.ruff.lint.flake8-pytest-style] parametrize-values-type = "tuple" @@ -147,13 +119,28 @@ inline-quotes = "single" [tool.ruff.lint.isort] force-single-line = true -known-first-party = ["foobar", "test", "testing"] +known-first-party = ["pypkg", "tests", "testing"] order-by-type = false required-imports = ["from __future__ import annotations"] [tool.ruff.lint.per-file-ignores] -"*/__init__.py" = ["F401"] -"*/*_test.py" = ["D10"] +# __init__.py commonly re-exports names: allow unused/star imports. +"*/__init__.py" = ["F401", "F403"] +# Test modules and helpers: relax rules that add friction without value in +# tests (assertions, missing docstrings/annotations, magic values, and access +# to private members of the code under test). +"tests/**" = [ + "S101", # asserts are how pytest tests work + "D", # docstrings not required in tests + "ANN", # type annotations not required in tests + "PLR2004", # magic values are fine in test expectations + "SLF001", # tests may touch private members + "INP001", # test dirs are not import packages +] +"testing/**" = ["S101", "D", "ANN", "PLR2004", "SLF001"] +"*_test.py" = ["S101", "D", "ANN", "PLR2004", "SLF001"] +# Docs helper scripts are not an importable package. +"docs/**" = ["INP001"] [tool.ruff.lint.pydocstyle] convention = "google" @@ -162,4 +149,10 @@ convention = "google" exclude = ["tests*", "testing*"] namespaces = false +# Spell checking is handled by crate-ci/typos (see .pre-commit-config.yaml), +# which respects .gitignore. Exclude the lockfile since its hashes trip up the +# spell checker. https://github.com/crate-ci/typos +[tool.typos.files] +extend-exclude = ["uv.lock"] + [tool.setuptools_scm] diff --git a/testing/README.md b/testing/README.md index 5931963..4681576 100644 --- a/testing/README.md +++ b/testing/README.md @@ -1,4 +1,4 @@ -# Testing infrastructure for foobar +# Testing infrastructure for pypkg Code that is useful for creating and running tests but is not a test itself. Test infrastructure may include items like mock object, test runners, example data, and more. diff --git a/tests/README.md b/tests/README.md index 5c59416..332ea79 100644 --- a/tests/README.md +++ b/tests/README.md @@ -1,4 +1,4 @@ -# Tests for foobar +# Tests for pypkg Test files should take the form `*_test.py` and tests inside files should be top-level functions named `test_*()`. diff --git a/tests/__init__.py b/tests/__init__.py index 05e2a5c..bbeb196 100644 --- a/tests/__init__.py +++ b/tests/__init__.py @@ -1,3 +1,3 @@ -"""foobar unit tests.""" +"""pypkg unit tests.""" from __future__ import annotations diff --git a/tests/bar_test.py b/tests/bar_test.py index 1efd58b..65f63e5 100644 --- a/tests/bar_test.py +++ b/tests/bar_test.py @@ -2,7 +2,7 @@ import pytest -from foobar.foo import bar +from pypkg.foo import bar from testing.data import DATA diff --git a/tox.ini b/tox.ini index 9b72e2d..9bc0217 100644 --- a/tox.ini +++ b/tox.ini @@ -1,18 +1,23 @@ [tox] -envlist = py310, py311, 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