diff --git a/idanalysis/idanalysis_tutorial.ipynb b/examples/idanalysis_tutorial.ipynb similarity index 100% rename from idanalysis/idanalysis_tutorial.ipynb rename to examples/idanalysis_tutorial.ipynb diff --git a/pyproject.toml b/pyproject.toml new file mode 100644 index 0000000..a2416f8 --- /dev/null +++ b/pyproject.toml @@ -0,0 +1,72 @@ +[build-system] +requires = ["setuptools>=44"] +build-backend = "setuptools.build_meta" + +[project] +name = "idanalysis" +authors = [{ name = "lnls-fac" } ] +maintainers = [ + {name = "Gabriel Rezende de Ascenção", email = "gabriel.ascencao@lnls.br"}, +] +description = "ID Analysis Package" +readme = "README.md" +dynamic = ["version", "dependencies"] +requires-python = ">=3.6" +classifiers = [ + "Intended Audience :: Science/Research", + "Programming Language :: Python", + "Topic :: Scientific/Engineering", +] +keywords = ["SIRIUS", "python", "Accelerator Physics", "Insertion Devices"] + +license = "GPL-3.0" +license-files= [ "LICENSE", ] + +[project.urls] +Homepage = "https://github.com/lnls-fac/idanalysis" +Download = "https://github.com/lnls-fac/idanalysis" +Repository = "https://github.com/lnls-fac/idanalysis.git" +Issues = "https://github.com/lnls-fac/idanalysis/issues" + +# --- Setuptools specific configurations --- +[tool.setuptools] +include-package-data = true + +[tool.setuptools.dynamic] +version = { file = "VERSION" } +dependencies = { file = "requirements.txt" } + +[tool.setuptools.package-data] +idanalysis = ["VERSION"] + +# --- linter and formatter configurations --- +[tool.ruff] +select = [ + "W", "E", "A", "B", "C90", "D", "I002", "N", "F", "G", "ARG", "S", "NPY"] +ignore = [ + "D203", "D204", "D213", "D215", "D400", "D401", "D404", "D406", "D407", + "D408", "D409", "D413", "E203", "E226"] +ignore-init-module-imports = true +preview = true +line-length = 79 +fix = true + +[tool.ruff.extend-per-file-ignores] +"__init__.py" = ["F401", "F821"] + +[tool.ruff.format] +skip-magic-trailing-comma = true + +[tool.ruff.lint.isort] +split-on-trailing-comma = false +combine-as-imports = true + +[tool.isort] +split_on_trailing_comma = false +combine_as_imports = true +combine_star = true +multi_line_output = "HANGING_INDENT" +order_by_type = false + +[tool.black] +line-length = 79 diff --git a/requirements.txt b/requirements.txt new file mode 100644 index 0000000..1307a84 --- /dev/null +++ b/requirements.txt @@ -0,0 +1,4 @@ +numpy>=1.8 +scipy>=1.3 +mathphys>=0.7 +matplotlib>=1.4 diff --git a/setup.py b/setup.py index 35e2750..eaa6bc6 100755 --- a/setup.py +++ b/setup.py @@ -1,11 +1,13 @@ #!/usr/bin/env python-sirius -import pkg_resources +import pathlib + from setuptools import find_packages, setup def get_abs_path(relative): - return pkg_resources.resource_filename(__name__, relative) + """.""" + return str(pathlib.Path(__file__).parent / relative) with open(get_abs_path("README.md"), "r") as _f: @@ -16,9 +18,8 @@ def get_abs_path(relative): __version__ = _f.read().strip() -_requirements = ['', ] -#with open(get_abs_path("requirements.txt"), "r") as _f: -# _requirements = _f.read().strip().split("\n") +with open(get_abs_path("requirements.txt"), "r") as _f: + _requirements = _f.read().strip().split("\n") setup( diff --git a/apu22/kickmaps/measurements/kickmap-ID_phase_pos00p000.txt b/sirius_ids/apu22/kickmaps/measurements/kickmap-ID_phase_pos00p000.txt similarity index 100% rename from apu22/kickmaps/measurements/kickmap-ID_phase_pos00p000.txt rename to sirius_ids/apu22/kickmaps/measurements/kickmap-ID_phase_pos00p000.txt diff --git a/apu22/kickmaps/measurements/kickmap-ID_phase_pos11p000.txt b/sirius_ids/apu22/kickmaps/measurements/kickmap-ID_phase_pos11p000.txt similarity index 100% rename from apu22/kickmaps/measurements/kickmap-ID_phase_pos11p000.txt rename to sirius_ids/apu22/kickmaps/measurements/kickmap-ID_phase_pos11p000.txt diff --git a/apu22/kickmaps/model/kickmap-ID_phase_pos00p000.txt b/sirius_ids/apu22/kickmaps/model/kickmap-ID_phase_pos00p000.txt similarity 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sirius_ids/ivu18/kickmaps/model/kickmap-ID_gap_pos15p000.txt diff --git a/ivu18/kickmaps/model/kickmap-ID_gap_pos20p000.txt b/sirius_ids/ivu18/kickmaps/model/kickmap-ID_gap_pos20p000.txt similarity index 100% rename from ivu18/kickmaps/model/kickmap-ID_gap_pos20p000.txt rename to sirius_ids/ivu18/kickmaps/model/kickmap-ID_gap_pos20p000.txt diff --git a/ivu18/kickmaps/model/kickmap-ID_gap_pos24p000.txt b/sirius_ids/ivu18/kickmaps/model/kickmap-ID_gap_pos24p000.txt similarity index 100% rename from ivu18/kickmaps/model/kickmap-ID_gap_pos24p000.txt rename to sirius_ids/ivu18/kickmaps/model/kickmap-ID_gap_pos24p000.txt diff --git a/ivu18/sirius_analysis.ipynb b/sirius_ids/ivu18/sirius_analysis.ipynb similarity index 100% rename from ivu18/sirius_analysis.ipynb rename to sirius_ids/ivu18/sirius_analysis.ipynb diff --git a/papu50/kickmaps/model/kickmap-ID_phase_pos00p000.txt b/sirius_ids/papu50/kickmaps/model/kickmap-ID_phase_pos00p000.txt similarity index 100% rename from papu50/kickmaps/model/kickmap-ID_phase_pos00p000.txt rename to sirius_ids/papu50/kickmaps/model/kickmap-ID_phase_pos00p000.txt diff --git a/papu50/kickmaps/model/kickmap-ID_phase_pos04p930.txt b/sirius_ids/papu50/kickmaps/model/kickmap-ID_phase_pos04p930.txt similarity index 100% rename from papu50/kickmaps/model/kickmap-ID_phase_pos04p930.txt rename to sirius_ids/papu50/kickmaps/model/kickmap-ID_phase_pos04p930.txt diff --git a/papu50/kickmaps/model/kickmap-ID_phase_pos25p000.txt b/sirius_ids/papu50/kickmaps/model/kickmap-ID_phase_pos25p000.txt similarity index 100% rename from papu50/kickmaps/model/kickmap-ID_phase_pos25p000.txt rename to sirius_ids/papu50/kickmaps/model/kickmap-ID_phase_pos25p000.txt diff --git a/ue44/kickmaps/model/kickmap-ID_phase_pos00p000_de_pos00p000.txt b/sirius_ids/ue44/kickmaps/model/kickmap-ID_phase_pos00p000_de_pos00p000.txt similarity index 100% rename from ue44/kickmaps/model/kickmap-ID_phase_pos00p000_de_pos00p000.txt rename to sirius_ids/ue44/kickmaps/model/kickmap-ID_phase_pos00p000_de_pos00p000.txt diff --git a/ue44/kickmaps/model/kickmap-ID_phase_pos11p000_de_pos00p000.txt b/sirius_ids/ue44/kickmaps/model/kickmap-ID_phase_pos11p000_de_pos00p000.txt similarity index 100% rename from ue44/kickmaps/model/kickmap-ID_phase_pos11p000_de_pos00p000.txt rename to sirius_ids/ue44/kickmaps/model/kickmap-ID_phase_pos11p000_de_pos00p000.txt diff --git a/ue44/kickmaps/model/kickmap-ID_phase_pos22p000_de_pos00p000.txt b/sirius_ids/ue44/kickmaps/model/kickmap-ID_phase_pos22p000_de_pos00p000.txt similarity index 100% rename from ue44/kickmaps/model/kickmap-ID_phase_pos22p000_de_pos00p000.txt rename to sirius_ids/ue44/kickmaps/model/kickmap-ID_phase_pos22p000_de_pos00p000.txt diff --git a/vpu29/kickmaps/measurements/kickmap-ID_gap_pos10p000.txt b/sirius_ids/vpu29/kickmaps/measurements/kickmap-ID_gap_pos10p000.txt similarity index 100% rename from vpu29/kickmaps/measurements/kickmap-ID_gap_pos10p000.txt rename to sirius_ids/vpu29/kickmaps/measurements/kickmap-ID_gap_pos10p000.txt diff --git a/vpu29/kickmaps/measurements/kickmap-ID_gap_pos10p500.txt b/sirius_ids/vpu29/kickmaps/measurements/kickmap-ID_gap_pos10p500.txt similarity index 100% rename from vpu29/kickmaps/measurements/kickmap-ID_gap_pos10p500.txt rename to sirius_ids/vpu29/kickmaps/measurements/kickmap-ID_gap_pos10p500.txt diff --git a/vpu29/kickmaps/measurements/kickmap-ID_gap_pos9p700.txt b/sirius_ids/vpu29/kickmaps/measurements/kickmap-ID_gap_pos9p700.txt similarity index 100% rename from vpu29/kickmaps/measurements/kickmap-ID_gap_pos9p700.txt rename to sirius_ids/vpu29/kickmaps/measurements/kickmap-ID_gap_pos9p700.txt diff --git a/vpu29/kickmaps/measurements/kickmap_gap_pos11p500.txt b/sirius_ids/vpu29/kickmaps/measurements/kickmap_gap_pos11p500.txt similarity index 100% rename from vpu29/kickmaps/measurements/kickmap_gap_pos11p500.txt rename to sirius_ids/vpu29/kickmaps/measurements/kickmap_gap_pos11p500.txt diff --git a/wig180/kickmaps/model/kickmap-ID_gap_pos45p000.txt b/sirius_ids/wig180/kickmaps/model/kickmap-ID_gap_pos45p000.txt similarity index 100% rename from wig180/kickmaps/model/kickmap-ID_gap_pos45p000.txt rename to sirius_ids/wig180/kickmaps/model/kickmap-ID_gap_pos45p000.txt diff --git a/wig180/kickmaps/model/kickmap-ID_gap_pos49p700.txt b/sirius_ids/wig180/kickmaps/model/kickmap-ID_gap_pos49p700.txt similarity index 100% rename from wig180/kickmaps/model/kickmap-ID_gap_pos49p700.txt rename to sirius_ids/wig180/kickmaps/model/kickmap-ID_gap_pos49p700.txt diff --git a/wig180/kickmaps/model/kickmap-ID_gap_pos59p600.txt b/sirius_ids/wig180/kickmaps/model/kickmap-ID_gap_pos59p600.txt similarity index 100% rename from wig180/kickmaps/model/kickmap-ID_gap_pos59p600.txt rename to sirius_ids/wig180/kickmaps/model/kickmap-ID_gap_pos59p600.txt diff --git a/wls/model/kickmap-ID_curr_pos01p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos01p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos01p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos01p000.txt diff --git a/wls/model/kickmap-ID_curr_pos100p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos100p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos100p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos100p000.txt diff --git a/wls/model/kickmap-ID_curr_pos10p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos10p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos10p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos10p000.txt diff --git a/wls/model/kickmap-ID_curr_pos120p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos120p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos120p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos120p000.txt diff --git a/wls/model/kickmap-ID_curr_pos140p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos140p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos140p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos140p000.txt diff --git a/wls/model/kickmap-ID_curr_pos160p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos160p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos160p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos160p000.txt diff --git a/wls/model/kickmap-ID_curr_pos200p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos200p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos200p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos200p000.txt diff --git a/wls/model/kickmap-ID_curr_pos20p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos20p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos20p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos20p000.txt diff --git a/wls/model/kickmap-ID_curr_pos227p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos227p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos227p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos227p000.txt diff --git a/wls/model/kickmap-ID_curr_pos250p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos250p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos250p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos250p000.txt diff --git a/wls/model/kickmap-ID_curr_pos40p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos40p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos40p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos40p000.txt diff --git a/wls/model/kickmap-ID_curr_pos60p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos60p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos60p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos60p000.txt diff --git a/wls/model/kickmap-ID_curr_pos80p000.txt b/sirius_ids/wls/model/kickmap-ID_curr_pos80p000.txt similarity index 100% rename from wls/model/kickmap-ID_curr_pos80p000.txt rename to sirius_ids/wls/model/kickmap-ID_curr_pos80p000.txt diff --git a/wls/read_kickmaps.ipynb b/sirius_ids/wls/read_kickmaps.ipynb similarity index 100% rename from wls/read_kickmaps.ipynb rename to sirius_ids/wls/read_kickmaps.ipynb diff --git a/wls/ring_analysis.ipynb b/sirius_ids/wls/ring_analysis.ipynb similarity index 100% rename from wls/ring_analysis.ipynb rename to sirius_ids/wls/ring_analysis.ipynb diff --git a/wls/wls_data.ipynb b/sirius_ids/wls/wls_data.ipynb similarity index 100% rename from wls/wls_data.ipynb rename to sirius_ids/wls/wls_data.ipynb