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embed.py
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executable file
·1513 lines (1301 loc) · 56.4 KB
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#!/usr/bin/env python3
"""
embed.py — Multi-provider embedding engine with hybrid search
Supports any OpenAI-compatible embedding API:
- OpenAI (text-embedding-3-small)
- Fireworks AI (nomic-ai/nomic-embed-text-v1.5) — very cheap
- OpenRouter (routes to various providers)
- Any custom endpoint (Ollama, LM Studio, vLLM, etc.)
Fallback: TF-IDF (scikit-learn) when no API key is available.
Storage: Regular SQLite table with blob vectors (zero extensions needed).
Usage:
python embed.py --setup # Interactive provider setup
python embed.py --build # Generate embeddings for all content
python embed.py --search "query text" # Semantic search
python embed.py --status # Show embedding status
python embed.py --providers # List available providers
python embed.py --test # Test current provider connectivity
"""
import hashlib
import json
import os
import re
import sqlite3
import ssl
import struct
import sys
import time
import urllib.error
import urllib.request
from math import sqrt
from pathlib import Path
# Fix Windows console encoding
if os.name == "nt":
try:
sys.stdout.reconfigure(encoding="utf-8", errors="replace")
sys.stderr.reconfigure(encoding="utf-8", errors="replace")
except Exception:
pass
# ── Paths ──────────────────────────────────────────────────────────────
TOOLS_DIR = Path(__file__).resolve().parent
SESSION_STATE = Path.home() / ".copilot" / "session-state"
DB_PATH = Path(os.environ.get("SK_DB_PATH", str(SESSION_STATE / "knowledge.db"))).expanduser()
CONFIG_PATH = TOOLS_DIR / "embedding-config.json"
# SSL verification — disable with --no-verify-ssl flag or COPILOT_NO_VERIFY_SSL=1
NO_VERIFY_SSL = False
def _stable_sha256(*parts) -> str:
payload = "\0".join("" if p is None else str(p) for p in parts)
return hashlib.sha256(payload.encode("utf-8")).hexdigest()
def _default_local_replica_id() -> str:
host = os.environ.get("HOSTNAME") or os.environ.get("COMPUTERNAME") or ""
user = os.environ.get("USER") or os.environ.get("USERNAME") or ""
return f"replica-{_stable_sha256('local-replica', host, user, str(Path.home()))[:16]}"
def _get_local_replica_id(db: sqlite3.Connection) -> str:
for table in ("sync_state", "sync_metadata"):
try:
row = db.execute(f"SELECT value FROM {table} WHERE key='local_replica_id'").fetchone()
except sqlite3.OperationalError:
continue
current = str(row[0]) if row and row[0] else ""
if current and current != "local":
return current
replica_id = _default_local_replica_id()
for table in ("sync_state", "sync_metadata"):
try:
db.execute(
f"""
INSERT INTO {table} (key, value)
VALUES ('local_replica_id', ?)
ON CONFLICT(key) DO UPDATE SET
value = excluded.value,
updated_at = datetime('now')
""",
(replica_id,),
)
except sqlite3.OperationalError:
pass
return replica_id or "local"
def _normalize_search_feedback_origin(origin_replica_id: str, local_replica_id: str) -> str:
origin = (origin_replica_id or "").strip()
if not origin or origin == "local":
return local_replica_id or "local"
return origin
def _enqueue_sync_op_fail_open(
db: sqlite3.Connection,
table_name: str,
row_stable_id: str,
row_payload: dict,
op_type: str = "upsert",
):
try:
tools_dir = str(Path(__file__).resolve().parent)
if tools_dir not in sys.path:
sys.path.insert(0, tools_dir)
from sync_enqueue import enqueue_sync_op_fail_open
enqueue_sync_op_fail_open(db, table_name, row_stable_id, row_payload, op_type)
except Exception:
return
def _seed_local_only_sync_policy(db: sqlite3.Connection):
policy_sql = db.execute(
"SELECT sql FROM sqlite_master WHERE type='table' AND name='sync_table_policies'"
).fetchone()
needs_rebuild = policy_sql and "upload_only" not in (policy_sql[0] or "")
if needs_rebuild:
db.executescript("""
CREATE TABLE sync_table_policies_new (
table_name TEXT PRIMARY KEY,
sync_scope TEXT NOT NULL CHECK(sync_scope IN ('canonical', 'local_only', 'upload_only')),
stable_id_column TEXT DEFAULT ''
);
INSERT INTO sync_table_policies_new (table_name, sync_scope, stable_id_column)
SELECT table_name, sync_scope, COALESCE(stable_id_column, '')
FROM sync_table_policies;
DROP TABLE sync_table_policies;
ALTER TABLE sync_table_policies_new RENAME TO sync_table_policies;
""")
db.executescript("""
CREATE TABLE IF NOT EXISTS sync_metadata (
key TEXT PRIMARY KEY,
value TEXT NOT NULL,
updated_at TEXT DEFAULT (datetime('now'))
);
CREATE TABLE IF NOT EXISTS sync_state (
key TEXT PRIMARY KEY,
value TEXT NOT NULL,
updated_at TEXT DEFAULT (datetime('now'))
);
CREATE TABLE IF NOT EXISTS sync_txns (
txn_id TEXT PRIMARY KEY,
replica_id TEXT NOT NULL,
status TEXT NOT NULL CHECK(status IN ('pending', 'committed', 'failed')),
created_at TEXT NOT NULL,
committed_at TEXT DEFAULT ''
);
CREATE TABLE IF NOT EXISTS sync_ops (
id INTEGER PRIMARY KEY AUTOINCREMENT,
txn_id TEXT NOT NULL,
table_name TEXT NOT NULL,
op_type TEXT NOT NULL CHECK(op_type IN ('insert', 'update', 'delete', 'upsert')),
row_stable_id TEXT NOT NULL,
row_payload TEXT NOT NULL,
op_index INTEGER NOT NULL,
created_at TEXT NOT NULL,
UNIQUE(txn_id, op_index)
);
CREATE INDEX IF NOT EXISTS idx_sync_ops_txn ON sync_ops(txn_id);
CREATE INDEX IF NOT EXISTS idx_sync_ops_table_row ON sync_ops(table_name, row_stable_id);
CREATE TABLE IF NOT EXISTS sync_cursors (
replica_id TEXT PRIMARY KEY,
last_txn_id TEXT DEFAULT '',
updated_at TEXT DEFAULT (datetime('now'))
);
CREATE TABLE IF NOT EXISTS sync_failures (
id INTEGER PRIMARY KEY AUTOINCREMENT,
txn_id TEXT DEFAULT '',
table_name TEXT DEFAULT '',
row_stable_id TEXT DEFAULT '',
error_code TEXT DEFAULT '',
error_message TEXT DEFAULT '',
failed_at TEXT NOT NULL,
retry_count INTEGER DEFAULT 0
);
CREATE INDEX IF NOT EXISTS idx_sync_failures_txn ON sync_failures(txn_id);
CREATE TABLE IF NOT EXISTS sync_table_policies (
table_name TEXT PRIMARY KEY,
sync_scope TEXT NOT NULL CHECK(sync_scope IN ('canonical', 'local_only', 'upload_only')),
stable_id_column TEXT DEFAULT ''
);
""")
db.executemany(
"""
INSERT INTO sync_table_policies (table_name, sync_scope, stable_id_column)
VALUES (?, ?, ?)
ON CONFLICT(table_name) DO UPDATE SET
sync_scope = excluded.sync_scope,
stable_id_column = excluded.stable_id_column
""",
[
("sessions", "canonical", "id"),
("documents", "canonical", "stable_id"),
("sections", "canonical", "stable_id"),
("knowledge_entries", "canonical", "stable_id"),
("knowledge_relations", "canonical", "stable_id"),
("entity_relations", "canonical", "stable_id"),
("search_feedback", "canonical", "stable_id"),
("recall_events", "upload_only", ""),
("entry_recall_stats", "upload_only", ""),
("entry_recall_day_log", "upload_only", ""),
("entry_recall_query_log", "upload_only", ""),
("embeddings", "local_only", ""),
("embedding_meta", "local_only", ""),
("tfidf_model", "local_only", ""),
("knowledge_fts", "local_only", ""),
("ke_fts", "local_only", ""),
("sessions_fts", "local_only", ""),
("event_offsets", "local_only", ""),
],
)
db.execute("""
INSERT OR IGNORE INTO sync_metadata (key, value)
VALUES ('local_replica_id', 'local')
""")
db.execute("""
INSERT OR IGNORE INTO sync_state (key, value)
VALUES ('local_replica_id', 'local')
""")
# ── Default provider configs ──────────────────────────────────────────
DEFAULT_CONFIG = {
"active_provider": "auto", # "auto" tries env vars in order
"fallback": "tfidf", # "tfidf" or "none"
"batch_size": 100, # embeddings per API call (Fireworks supports up to 2048)
"rrf_k": 60, # RRF ranking constant (higher = flatter score curve)
"providers": {
"openai": {
"base_url": "https://api.openai.com/v1",
"model": "text-embedding-3-small",
"dimensions": 1536,
"env_key": "OPENAI_API_KEY",
"api_key": "",
},
"fireworks": {
"base_url": "https://api.fireworks.ai/inference/v1",
"model": "nomic-ai/nomic-embed-text-v1.5",
"dimensions": 768,
"env_key": "FIREWORKS_API_KEY",
"api_key": "",
},
"openrouter": {
"base_url": "https://openrouter.ai/api/v1",
"model": "openai/text-embedding-3-small",
"dimensions": 1536,
"env_key": "OPENROUTER_API_KEY",
"api_key": "",
},
"custom": {"base_url": "", "model": "", "dimensions": 768, "env_key": "EMBEDDING_API_KEY", "api_key": ""},
},
}
# Provider priority for "auto" mode
AUTO_PRIORITY = ["fireworks", "openai", "openrouter", "custom"]
# ═══════════════════════════════════════════════════════════════════════
# Configuration Management
# ═══════════════════════════════════════════════════════════════════════
def load_config() -> dict:
"""Load config from file, merging with defaults."""
config = json.loads(json.dumps(DEFAULT_CONFIG)) # deep copy
if CONFIG_PATH.exists():
try:
user_config = json.loads(CONFIG_PATH.read_text(encoding="utf-8"))
# Merge providers
for name, prov in user_config.get("providers", {}).items():
if name in config["providers"]:
config["providers"][name].update(prov)
else:
config["providers"][name] = prov
# Merge top-level keys
for key in ("active_provider", "fallback", "batch_size", "rrf_k"):
if key in user_config:
config[key] = user_config[key]
except (json.JSONDecodeError, KeyError):
pass
_check_config_permissions()
return config
def _check_config_permissions():
"""Warn if config file has overly permissive permissions."""
if os.name == "nt" or not CONFIG_PATH.exists():
return
try:
mode = CONFIG_PATH.stat().st_mode & 0o777
if mode & 0o077: # group or other has access
print(f"⚠ {CONFIG_PATH} has permissive permissions ({oct(mode)}). Fixing to 0o600...", file=sys.stderr)
os.chmod(CONFIG_PATH, 0o600)
except OSError:
pass
def save_config(config: dict):
"""Save config to file with restrictive permissions."""
TOOLS_DIR.mkdir(parents=True, exist_ok=True)
CONFIG_PATH.write_text(json.dumps(config, indent=2, ensure_ascii=False), encoding="utf-8")
# Restrict file permissions to owner-only (not world-readable)
if os.name != "nt":
os.chmod(CONFIG_PATH, 0o600)
def get_api_key(provider_config: dict) -> str:
"""Get API key from environment variable or config file."""
# Prefer environment variable (more secure than config file)
env_key = provider_config.get("env_key", "")
if env_key:
env_val = os.environ.get(env_key, "")
if env_val:
return env_val
# Fall back to config file key
key = provider_config.get("api_key", "")
if key:
return key
return ""
def resolve_provider(config: dict) -> tuple:
"""Resolve which provider to use. Returns (name, provider_config) or (None, None)."""
active = config.get("active_provider", "auto")
if active != "auto":
prov = config["providers"].get(active)
if prov and get_api_key(prov):
return active, prov
return None, None
# Auto mode: try providers in priority order
for name in AUTO_PRIORITY:
prov = config["providers"].get(name)
if prov and get_api_key(prov) and prov.get("base_url"):
return name, prov
return None, None
# ═══════════════════════════════════════════════════════════════════════
# Embedding API (OpenAI-compatible, stdlib only)
# ═══════════════════════════════════════════════════════════════════════
class EmbeddingAuthError(RuntimeError):
"""Auth error — should fallback to TF-IDF, not retry."""
pass
class EmbeddingRateLimitError(RuntimeError):
"""Rate limit — should retry with backoff."""
pass
class EmbeddingNetworkError(RuntimeError):
"""Network/timeout — should retry then fallback."""
pass
def _classify_api_error(e: urllib.error.HTTPError) -> tuple[str, str]:
"""Classify HTTP error into (category, user_message). Categories: auth, rate_limit, server."""
body = e.read().decode("utf-8", errors="replace")[:500]
if e.code in (401, 403):
return "auth", f"🔑 Auth failed ({e.code}): API key invalid or expired. Falling back to TF-IDF."
elif e.code == 429:
return "rate_limit", "⏳ Rate limited (429). Retrying with backoff..."
elif e.code >= 500:
return "server", f"🔥 Server error ({e.code}). Retrying..."
elif e.code == 404:
return "auth", f"🔍 Model not found (404): Check model name in config. {body[:100]}"
else:
return "server", f"❌ API error {e.code}: {body[:200]}"
def call_embedding_api(texts: list[str], provider_config: dict, max_retries: int = 3) -> list[list[float]]:
"""Call an OpenAI-compatible embedding API with classified error handling and retry."""
base_url = provider_config["base_url"].rstrip("/")
model = provider_config["model"]
api_key = get_api_key(provider_config)
dimensions = provider_config.get("dimensions")
url = f"{base_url}/embeddings"
payload = {
"input": texts,
"model": model,
}
if dimensions:
payload["dimensions"] = dimensions
data = json.dumps(payload).encode("utf-8")
ssl_ctx = None
if NO_VERIFY_SSL:
ssl_ctx = ssl.create_default_context()
ssl_ctx.check_hostname = False
ssl_ctx.verify_mode = ssl.CERT_NONE
last_error = None
for attempt in range(max_retries):
req = urllib.request.Request(url, data=data, method="POST")
req.add_header("Content-Type", "application/json")
req.add_header("Authorization", f"Bearer {api_key}")
req.add_header("User-Agent", "copilot-session-tools/1.0")
try:
with urllib.request.urlopen(req, timeout=120, context=ssl_ctx) as resp:
result = json.loads(resp.read().decode("utf-8"))
break
except urllib.error.HTTPError as e:
category, message = _classify_api_error(e)
if category == "auth":
# Auth errors: no retry, raise specific exception for fallback
print(f" {message}", file=sys.stderr)
raise EmbeddingAuthError(message) from None
elif category == "rate_limit":
last_error = message
wait = min((2**attempt) + 1, 30)
print(f" {message} ({wait}s)", file=sys.stderr)
time.sleep(wait)
continue
else: # server error
last_error = message
wait = (2**attempt) + 1
print(f" {message} Retry {attempt + 1}/{max_retries} in {wait}s", file=sys.stderr)
time.sleep(wait)
continue
except (urllib.error.URLError, TimeoutError, OSError) as e:
reason = getattr(e, "reason", str(e))
last_error = f"🌐 Network error: {reason}"
wait = (2**attempt) + 1
print(f" {last_error} Retry {attempt + 1}/{max_retries} in {wait}s", file=sys.stderr)
time.sleep(wait)
continue
else:
if "Rate limit" in (last_error or ""):
raise EmbeddingRateLimitError(last_error)
elif "Network" in (last_error or "") or "Connection" in (last_error or ""):
raise EmbeddingNetworkError(last_error or "Max retries exceeded")
raise RuntimeError(last_error or "Max retries exceeded")
# Parse OpenAI-format response
embeddings = []
for item in sorted(result.get("data", []), key=lambda x: x.get("index", 0)):
embeddings.append(item["embedding"])
if len(embeddings) != len(texts):
raise RuntimeError(f"Expected {len(texts)} embeddings, got {len(embeddings)}")
return embeddings
def embed_batch(
texts: list[str], config: dict, provider_name: str = None, provider_config: dict = None
) -> list[list[float]]:
"""Embed a batch of texts, respecting batch_size limit."""
if not provider_name or not provider_config:
provider_name, provider_config = resolve_provider(config)
if not provider_config:
raise RuntimeError("No embedding provider configured. Run: python embed.py --setup")
batch_size = config.get("batch_size", 100)
all_embeddings = []
total = len(texts)
num_batches = (total + batch_size - 1) // batch_size
for i in range(0, total, batch_size):
chunk = texts[i : i + batch_size]
batch_num = i // batch_size + 1
print(f" batch {batch_num}/{num_batches} ({len(chunk)} items)...", end="", flush=True)
embeddings = call_embedding_api(chunk, provider_config)
all_embeddings.extend(embeddings)
print(" ✓")
if i + batch_size < total:
time.sleep(0.3) # rate limit courtesy
return all_embeddings
# ═══════════════════════════════════════════════════════════════════════
# TF-IDF Fallback (optional, requires scikit-learn)
# ═══════════════════════════════════════════════════════════════════════
def tfidf_available() -> bool:
"""Check if scikit-learn is available."""
try:
import sklearn # noqa: F401
return True
except ImportError:
return False
def build_tfidf(texts: list[str], doc_ids: list[int]) -> bytes:
"""Build TF-IDF model and return serialized (vectorizer params, matrix, doc_ids)."""
from scipy.sparse import coo_matrix
from sklearn.feature_extraction.text import TfidfVectorizer
vectorizer = TfidfVectorizer(
max_features=8000,
ngram_range=(1, 2),
sublinear_tf=True,
strip_accents="unicode",
min_df=1,
max_df=0.95,
)
matrix = vectorizer.fit_transform(texts)
coo = coo_matrix(matrix)
model = {
"vocabulary": {k: int(v) for k, v in vectorizer.vocabulary_.items()},
"idf": vectorizer.idf_.tolist(),
"matrix_row": coo.row.tolist(),
"matrix_col": coo.col.tolist(),
"matrix_data": coo.data.tolist(),
"matrix_shape": [int(x) for x in coo.shape],
"doc_ids": [int(x) for x in doc_ids],
"params": {
"max_features": 8000,
"ngram_range": [1, 2],
"sublinear_tf": True,
"strip_accents": "unicode",
"min_df": 1,
"max_df": 0.95,
},
}
return json.dumps(model).encode("utf-8")
def search_tfidf(query: str, model_blob: bytes, limit: int = 10) -> list[tuple]:
"""Search TF-IDF model. Returns [(doc_id, score), ...]."""
from sklearn.feature_extraction.text import TfidfVectorizer
from sklearn.metrics.pairwise import cosine_similarity
# Reject old pickle format — unsafe deserialization
if model_blob[:2] in (b"\x80\x04", b"\x80\x05"):
print(
"⚠ TF-IDF model uses deprecated pickle format (unsafe). "
"Re-run embedding to upgrade: python embed.py --rebuild-tfidf",
file=sys.stderr,
)
return []
# New JSON format
import numpy as np
from scipy.sparse import csr_matrix
model = json.loads(model_blob.decode("utf-8"))
# Validate required keys
required = {"vocabulary", "idf", "matrix_row", "matrix_col", "matrix_data", "matrix_shape", "doc_ids"}
if not required.issubset(model.keys()):
raise ValueError("Invalid TF-IDF model format")
# Reconstruct vectorizer
vectorizer = TfidfVectorizer(
max_features=model.get("params", {}).get("max_features", 8000),
ngram_range=tuple(model.get("params", {}).get("ngram_range", [1, 2])),
sublinear_tf=model.get("params", {}).get("sublinear_tf", True),
strip_accents=model.get("params", {}).get("strip_accents", "unicode"),
min_df=model.get("params", {}).get("min_df", 1),
max_df=model.get("params", {}).get("max_df", 0.95),
)
vectorizer.vocabulary_ = model["vocabulary"]
vectorizer.idf_ = np.array(model["idf"])
vectorizer._tfidf._idf_diag = csr_matrix(np.diag(vectorizer.idf_))
# Reconstruct matrix
shape = tuple(model["matrix_shape"])
matrix = csr_matrix((model["matrix_data"], (model["matrix_row"], model["matrix_col"])), shape=shape)
doc_ids = model["doc_ids"]
query_vec = vectorizer.transform([query])
scores = cosine_similarity(query_vec, matrix).flatten()
top_idx = scores.argsort()[::-1][:limit]
return [(doc_ids[i], float(scores[i])) for i in top_idx if scores[i] > 0.01]
# ═══════════════════════════════════════════════════════════════════════
# Vector Storage (plain SQLite, no extensions needed)
# ═══════════════════════════════════════════════════════════════════════
def serialize_vector(vec: list[float]) -> bytes:
"""Serialize a float vector to bytes (little-endian float32)."""
return struct.pack(f"<{len(vec)}f", *vec)
def deserialize_vector(blob: bytes) -> list[float]:
"""Deserialize bytes to float vector."""
n = len(blob) // 4
return list(struct.unpack(f"<{n}f", blob))
def cosine_similarity_vectors(a: list[float], b: list[float]) -> float:
"""Compute cosine similarity between two vectors (pure Python)."""
if len(a) != len(b):
return 0.0
dot = sum(x * y for x, y in zip(a, b, strict=False))
norm_a = sqrt(sum(x * x for x in a))
norm_b = sqrt(sum(x * x for x in b))
if norm_a == 0 or norm_b == 0:
return 0.0
return dot / (norm_a * norm_b)
def ensure_embedding_tables(db: sqlite3.Connection):
"""Create embedding tables if they don't exist."""
db.executescript("""
CREATE TABLE IF NOT EXISTS embeddings (
id INTEGER PRIMARY KEY AUTOINCREMENT,
source_type TEXT NOT NULL,
source_id INTEGER NOT NULL,
provider TEXT NOT NULL,
model TEXT NOT NULL,
dimensions INTEGER NOT NULL,
vector BLOB NOT NULL,
text_preview TEXT DEFAULT '',
created_at TEXT,
UNIQUE(source_type, source_id)
);
CREATE INDEX IF NOT EXISTS idx_emb_source
ON embeddings(source_type, source_id);
CREATE TABLE IF NOT EXISTS embedding_meta (
key TEXT PRIMARY KEY,
value TEXT
);
CREATE TABLE IF NOT EXISTS tfidf_model (
id INTEGER PRIMARY KEY DEFAULT 1,
model_blob BLOB,
doc_count INTEGER DEFAULT 0,
built_at TEXT
);
""")
_seed_local_only_sync_policy(db)
try:
db.execute("ALTER TABLE search_feedback ADD COLUMN origin_replica_id TEXT DEFAULT 'local'")
except sqlite3.OperationalError:
pass
try:
db.execute("ALTER TABLE search_feedback ADD COLUMN stable_id TEXT")
except sqlite3.OperationalError:
pass
try:
local_replica_id = _get_local_replica_id(db)
rows = db.execute("""
SELECT id, created_at, result_kind, result_id, verdict, query,
COALESCE(origin_replica_id, ''), COALESCE(stable_id, '')
FROM search_feedback
""").fetchall()
for row in rows:
sf_id, created_at, result_kind, result_id, verdict, query, origin_replica_id, existing_stable = row
origin = _normalize_search_feedback_origin(origin_replica_id, local_replica_id)
stable_id = _stable_sha256(
"search_feedback",
created_at or "",
result_kind or "",
result_id or "",
verdict if verdict is not None else "",
query or "",
origin,
)
if existing_stable != stable_id or origin_replica_id != origin:
db.execute(
"""
UPDATE search_feedback
SET origin_replica_id = ?, stable_id = ?
WHERE id = ?
""",
(origin, stable_id, sf_id),
)
_enqueue_sync_op_fail_open(
db,
"search_feedback",
stable_id,
{
"query": query,
"result_id": result_id,
"result_kind": result_kind,
"verdict": verdict,
"created_at": created_at,
"origin_replica_id": origin,
"stable_id": stable_id,
},
)
db.execute("""
DELETE FROM search_feedback
WHERE id IN (
SELECT dupe.id
FROM search_feedback dupe
JOIN (
SELECT stable_id, MIN(id) AS keep_id
FROM search_feedback
WHERE COALESCE(stable_id, '') != ''
GROUP BY stable_id
HAVING COUNT(*) > 1
) grouped ON grouped.stable_id = dupe.stable_id
WHERE dupe.id != grouped.keep_id
)
""")
db.execute("CREATE UNIQUE INDEX IF NOT EXISTS uq_search_feedback_stable_id ON search_feedback(stable_id)")
except sqlite3.OperationalError:
pass
def store_embeddings(
db: sqlite3.Connection, source_type: str, items: list[tuple], provider: str, model: str, dimensions: int
):
"""Store embeddings in DB. items = [(source_id, vector, text_preview), ...]"""
ensure_embedding_tables(db)
now = time.strftime("%Y-%m-%dT%H:%M:%S")
for source_id, vector, preview in items:
blob = serialize_vector(vector)
db.execute(
"""
INSERT OR REPLACE INTO embeddings
(source_type, source_id, provider, model, dimensions, vector,
text_preview, created_at)
VALUES (?, ?, ?, ?, ?, ?, ?, ?)
""",
(source_type, source_id, provider, model, dimensions, blob, preview[:200], now),
)
db.execute(
"""
INSERT OR REPLACE INTO embedding_meta (key, value)
VALUES ('last_build', ?)
""",
(now,),
)
db.commit()
def vector_search(
db: sqlite3.Connection, query_vector: list[float], source_type: str = None, limit: int = 20
) -> list[tuple]:
"""Brute-force cosine similarity search. Returns [(source_type, source_id, score), ...]"""
sql = "SELECT source_type, source_id, vector FROM embeddings"
params = []
if source_type:
sql += " WHERE source_type = ?"
params.append(source_type)
rows = db.execute(sql, params).fetchall()
if not rows:
return []
results = []
for st, sid, blob in rows:
vec = deserialize_vector(blob)
score = cosine_similarity_vectors(query_vector, vec)
results.append((st, sid, score))
results.sort(key=lambda x: -x[2])
return results[:limit]
# ═══════════════════════════════════════════════════════════════════════
# Hybrid Search: FTS5 + Vector + RRF
# ═══════════════════════════════════════════════════════════════════════
def reciprocal_rank_fusion(ranked_lists: list[list], k: int = 60) -> list[tuple]:
"""
Merge multiple ranked lists using Reciprocal Rank Fusion.
Each list contains keys (any hashable type).
Returns [(key, rrf_score), ...] sorted by score desc.
"""
scores = {}
for ranked in ranked_lists:
for rank, key in enumerate(ranked):
scores[key] = scores.get(key, 0.0) + 1.0 / (k + rank + 1)
return sorted(scores.items(), key=lambda x: -x[1])
def _normalize_feedback_query(query: str) -> str:
"""Canonical query normalization for feedback matching."""
normalized = (query or "").lower()
normalized = normalized.strip()
normalized = re.sub(r"\s+", " ", normalized)
return normalized[:500]
def _apply_feedback_bias(
db: sqlite3.Connection,
query: str,
merged: list[tuple],
) -> tuple[list[tuple], dict[tuple, tuple[float, int]]]:
"""Apply query-scoped feedback bias while preserving original rrf_score values."""
if not merged:
return merged, {}
grouped_ids: dict[str, set[str]] = {"knowledge": set(), "section": set()}
key_to_feedback_id: dict[tuple, tuple[str, str]] = {}
for key, _ in merged:
if not isinstance(key, tuple) or not key:
continue
if key[0] == "knowledge" and len(key) >= 2:
rid = str(key[1])
grouped_ids["knowledge"].add(rid)
key_to_feedback_id[key] = ("knowledge", rid)
elif key[0] == "section" and len(key) >= 3:
rid = f"{key[1]}:{key[2]}"
grouped_ids["section"].add(rid)
key_to_feedback_id[key] = ("section", rid)
if not key_to_feedback_id:
return merged, {}
feedback_rows = []
try:
for result_kind, id_set in grouped_ids.items():
if not id_set:
continue
ids = sorted(id_set)
placeholders = ",".join("?" for _ in ids)
rows = db.execute(
f"""
SELECT query, result_id, result_kind, verdict
FROM search_feedback
WHERE result_kind = ?
AND result_id IN ({placeholders})
""",
[result_kind, *ids],
).fetchall()
feedback_rows.extend(rows)
except sqlite3.OperationalError:
return merged, {}
normalized_query = _normalize_feedback_query(query)
if not normalized_query:
return merged, {}
votes_by_key: dict[tuple[str, str], list[int]] = {}
for row in feedback_rows:
row_query = _normalize_feedback_query(row[0] or "")
if row_query != normalized_query:
continue
fk = (str(row[2] or ""), str(row[1] or ""))
votes_by_key.setdefault(fk, []).append(int(row[3]))
if not votes_by_key:
return merged, {}
base_scores = [float(rrf_score) for _, rrf_score in merged]
if len(base_scores) <= 1:
normalized_scores = [1.0 for _ in base_scores]
else:
min_score = min(base_scores)
max_score = max(base_scores)
if max_score == min_score:
normalized_scores = [1.0 for _ in base_scores]
else:
span = max_score - min_score
normalized_scores = [(score - min_score) / span for score in base_scores]
def _bias_for(feedback_key: tuple[str, str] | None) -> float:
if not feedback_key:
return 0.0
votes = votes_by_key.get(feedback_key, [])
if not votes:
return 0.0
non_neutral = [v for v in votes if v != 0]
if not non_neutral:
return 0.0
feedback_sum = sum(non_neutral)
return max(-0.15, min(0.15, feedback_sum * 0.05))
ranked = []
for idx, (key, rrf_score) in enumerate(merged):
feedback_key = key_to_feedback_id.get(key)
feedback_votes = votes_by_key.get(feedback_key, []) if feedback_key else []
feedback_count = len(feedback_votes)
feedback_bias = _bias_for(feedback_key)
normalized_base = normalized_scores[idx]
combined_score = normalized_base + feedback_bias
ranked.append((combined_score, idx, key, rrf_score, feedback_bias, feedback_count))
ranked.sort(key=lambda x: (-x[0], x[1]))
reranked = []
feedback_meta = {}
for _, _, key, rrf_score, feedback_bias, feedback_count in ranked:
reranked.append((key, rrf_score))
feedback_meta[key] = (float(feedback_bias), int(feedback_count))
return reranked, feedback_meta
def hybrid_search(
db: sqlite3.Connection, query: str, config: dict, limit: int = 10, fts_weight: float = 1.0, vec_weight: float = 1.0
) -> list[dict]:
"""
Hybrid search combining FTS5 keyword search + vector semantic search.
Returns merged results with source info.
"""
results_fts = []
results_vec = []
# ── FTS5 search ──
fts_query = query.strip()
if not any(c in fts_query for c in ['"', "*", "OR", "AND", "NOT", "NEAR"]):
terms = fts_query.split()
fts_query = " ".join(f'"{t}"*' for t in terms)
try:
fts_rows = db.execute(
"""
SELECT fts.document_id, fts.title, fts.section_name, fts.doc_type,
fts.session_id,
snippet(knowledge_fts, 2, '>>>', '<<<', '...', 64) as excerpt,
rank
FROM knowledge_fts fts
WHERE knowledge_fts MATCH ?
ORDER BY rank
LIMIT 30
""",
(fts_query,),
).fetchall()
for r in fts_rows:
key = ("section", r[0], r[2]) # (type, doc_id, section_name)
results_fts.append(
(
key,
{
"document_id": r[0],
"title": r[1],
"section_name": r[2],
"doc_type": r[3],
"session_id": r[4],
"excerpt": r[5],
"fts_rank": r[6],
"source": "keyword",
},
)
)
except sqlite3.OperationalError:
pass
# ── Vector search ──
query_vector = None
provider_name, provider_config = resolve_provider(config)
if provider_name and provider_config:
try:
vecs = call_embedding_api([query], provider_config)
query_vector = vecs[0]
except EmbeddingAuthError:
pass # Silent fallback — FTS results will be used
except (EmbeddingRateLimitError, EmbeddingNetworkError):
pass # Transient — silently use FTS only
except Exception as e:
print(f" [warn] Embedding API error: {e}", file=sys.stderr)
if query_vector:
vec_results = vector_search(db, query_vector, limit=30)
for st, sid, score in vec_results:
if score < 0.1:
continue
# Look up document info
if st == "section":
row = db.execute(
"""
SELECT s.document_id, d.title, s.section_name, d.doc_type,
d.session_id, SUBSTR(s.content, 1, 200) as excerpt
FROM sections s
JOIN documents d ON s.document_id = d.id
WHERE s.id = ?
""",
(sid,),
).fetchone()
if row:
key = ("section", row[0], row[2])
results_vec.append(
(
key,
{
"document_id": row[0],
"title": row[1],
"section_name": row[2],
"doc_type": row[3],
"session_id": row[4],
"excerpt": row[5],
"vec_score": score,
"source": "semantic",