TimeCycle/DESCRIPTION at master · nesscoder/TimeCycle · GitHub

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Package: TimeCycle
Title: TimeCycle: Topology Inspired MEthod for the Detection of Cycling Transcripts
Version: 1.0.0
Authors@R:
    	c(person(given = "Elan",
           family = "Ness-Cohn",
           role = c("aut", "cre"),
           email = "elanness-cohn2017@u.northwestern.edu",
           comment = c(ORCID = "0000-0002-3935-6667")),
	person(given = "Rosemary",
		family = "Braun",
		email = "rbraun@northwestern.edu",
		role = "aut",
		comment = c(ORCID = "0000-0001-9668-9866")),
	person(given = "NSF-Simons",
		family = "Center For Quatitative Biology",
		role = c("cph", "fnd")))
Description: TimeCycle is designed to detect rhythmic genes in circadian transcriptomic time-series data. Based on topological data analysis, TimeCycle provides a reliable and efficent reference-free framework for cycle detection --- handling custom sampling schemes, replicates, and missing data. See the TimeCycle website and accompanying paper for more information, documentation, and examples.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Imports:
    parallel,
    TDAstats,
    imputeTS,
    stats,
Suggests:
    knitr,
    rmarkdown,
    tidyverse,
    vembedr
VignetteBuilder: knitr
URL: https://github.com/nesscoder/TimeCycle
BugReports: https://github.com/nesscoder/TimeCycle/issues