Skip to content

Update pipeline to use MultiQC of latest version #46

@ochkalova

Description

@ochkalova

Description of the bug

MultiQC container failed due to segmentation fault on Mac machine. Temporary fix has been made:

 // TODO: version is temporarily set to 1.25.1 to avoid segfault happening in 1.32
    container "${workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container
        ? 'oras://community.wave.seqera.io/library/multiqc:1.25.1--6d0dfb7dbe16fbf9'
        : 'community.wave.seqera.io/library/multiqc:1.25.1--214d24b7702218de'}"

Command used and terminal output

Relevant files

No response

System information

No response

Metadata

Metadata

Assignees

Labels

bugSomething isn't working

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions