HyperTS/.github/workflows/python-pytest.yml at main · oaksharks/HyperTS · GitHub

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# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: Python pytest

on:
  push:
    branches: [ main ]
  pull_request:
    branches: [ main ]

jobs:
  build:

    runs-on: ${{ matrix.os }}
    strategy:
      fail-fast: false
      matrix:
        os: [ubuntu-latest, windows-latest]
        python-version: [3.7, 3.8] # feature-tools only update to 0.23.3 on python3.6 and the latest is 1.2.0(2021/11)
        tf_switch: [tf_Y, tf_N]
        prophet_switch: [prophet_Y, prophet_N]

        include:
          - os: ubuntu-latest
            python-version: 3.7
            prophet-build: py37h085eea5_3
            pystan-build: py37h9fdb41a_2
          - os: ubuntu-latest
            python-version: 3.8
            prophet-build: py38hd0cf306_3
            pystan-build: py38hc5bc63f_2
          - os: windows-latest
            python-version: 3.7
            prophet-build: py37h7813e69_3
            pystan-build: py37h631819c_3
          - os: windows-latest
            python-version: 3.8
            prophet-build: py38h43734a8_3
            pystan-build: py38h02adce6_3

        exclude:
          - os: windows-latest
            python-version: 3.6

          - tf_switch: tf_N
            prophet_switch: prophet_N

    steps:
    - uses: actions/checkout@v2
    - uses: conda-incubator/setup-miniconda@v2
      with:
        auto-update-conda: true
        python-version: ${{ matrix.python-version }}

    - name: Show conda
      shell: bash -l {0}
      run: conda info

    - name: Conda list pre
      shell: bash -l {0}
      run: conda list

    - name: Install prophet dependencies
      if:  ${{ matrix.prophet_switch == 'prophet_Y' }}
      shell: bash -l {0}
      run: |
        python -m pip install --upgrade pip
        conda install -y -c conda-forge prophet=1.0.1=${{ matrix.prophet-build }}
        conda install -y -c conda-forge pystan=2.19.1.1=${{ matrix.pystan-build }}

    - name: Install dependencies
      shell: bash -l {0}
      run: |
        python -m pip install --upgrade pip
        conda install scikit-learn==0.24.2
        conda install -y -c conda-forge sktime==0.8.1
        conda install -y -c conda-forge python-geohash
        pip install -q featuretools==0.27.1
        pip install -q git+https://github.com/DataCanvasIO/Hypernets
        pip install -q -r requirements.txt
        pip install scipy==1.7.3
        pip install -q pytest-cov==2.4.0  python-coveralls  codacy-coverage

    - name: Install tensorflow dependencies
      if:  ${{ matrix.tf_switch == 'prophet_Y' }}
      shell: bash -l {0}
      run: |
        pip install -q tensorflow==2.4.2
        pip install -q pyparsing==2.4.7
        pip install -q protobuf==3.20.1

    - name: Conda list
      shell: bash -l {0}
      run: conda list

    - name: Test with pytest
      shell: bash -l {0}
      run: |
        pytest --cov=hyperts --durations=30