From a209971ff60229941a9e69f0c11e8bdc32a496e5 Mon Sep 17 00:00:00 2001
From: Raphael-Gazzotti <125291580+Raphael-Gazzotti@users.noreply.github.com>
Date: Thu, 19 Mar 2026 09:33:53 +0100
Subject: [PATCH 1/4] Enhance workflow with HTTP status code responses and logs

Updated the workflow to include status codes and logs in the output for each triggered repository.
---
 .github/workflows/openMINDS_upstream.yml | 16 ++++++++--------
 1 file changed, 8 insertions(+), 8 deletions(-)

diff --git a/.github/workflows/openMINDS_upstream.yml b/.github/workflows/openMINDS_upstream.yml
index 97ec65c1..acc15855 100644
--- a/.github/workflows/openMINDS_upstream.yml
+++ b/.github/workflows/openMINDS_upstream.yml
@@ -1,5 +1,4 @@
 name: openMINDS_upstream
-
 on: 
   - push
   - workflow_dispatch
@@ -10,10 +9,11 @@ jobs:
     steps:
     - name: Trigger target repositories
       run: |
-        curl -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_json-schema/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
-        curl -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_MATLAB/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
-        curl -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_Python/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
-        curl -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_Java/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
-        curl -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_LinkML/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
-        curl -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_documentation/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
-        curl -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_documentation/actions/workflows/htaccess-deploy.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\njson-schema: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_json-schema/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\nMATLAB: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_MATLAB/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\nPython: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_Python/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\nJava: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_Java/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\nLinkML: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_LinkML/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\ndocs build: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_documentation/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\ndocs htaccess: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_documentation/actions/workflows/htaccess-deploy.yml/dispatches --data '{"ref": "pipeline"}'
+        

From 52c5633c4e336acd3724b85e15fce18cdeab29e7 Mon Sep 17 00:00:00 2001
From: Raphael-Gazzotti <125291580+Raphael-Gazzotti@users.noreply.github.com>
Date: Thu, 19 Mar 2026 09:37:04 +0100
Subject: [PATCH 2/4] Update openMINDS_upstream.yaml

---
 .github/workflows/openMINDS_upstream.yml | 7 ++++---
 1 file changed, 4 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/openMINDS_upstream.yml b/.github/workflows/openMINDS_upstream.yml
index acc15855..0dfb5575 100644
--- a/.github/workflows/openMINDS_upstream.yml
+++ b/.github/workflows/openMINDS_upstream.yml
@@ -1,4 +1,5 @@
 name: openMINDS_upstream
+
 on: 
   - push
   - workflow_dispatch
@@ -9,11 +10,11 @@ jobs:
     steps:
     - name: Trigger target repositories
       run: |
-        curl -s -w "\njson-schema: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_json-schema/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\nJSON-Schema: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_json-schema/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
         curl -s -w "\nMATLAB: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_MATLAB/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
         curl -s -w "\nPython: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_Python/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
         curl -s -w "\nJava: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_Java/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
         curl -s -w "\nLinkML: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_LinkML/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
-        curl -s -w "\ndocs build: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_documentation/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
-        curl -s -w "\ndocs htaccess: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_documentation/actions/workflows/htaccess-deploy.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\nDocs build: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_documentation/actions/workflows/build.yml/dispatches --data '{"ref": "pipeline"}'
+        curl -s -w "\nDocs htaccess: %{http_code}\n" -XPOST -u "${{secrets.PAT_USERNAME}}:${{secrets.PAT_TOKEN}}" -H "Accept: application/vnd.github.everest-preview+json" -H "Content-Type: application/json" https://api.github.com/repos/openMetadataInitiative/openMINDS_documentation/actions/workflows/htaccess-deploy.yml/dispatches --data '{"ref": "pipeline"}'
         

From 8598153ae0b25fedda5c0ec08850d7c880bfb527 Mon Sep 17 00:00:00 2001
From: Raphael-Gazzotti <125291580+Raphael-Gazzotti@users.noreply.github.com>
Date: Thu, 19 Mar 2026 10:32:47 +0100
Subject: [PATCH 3/4] Update workflow triggers for openMINDS_upstream

---
 .github/workflows/openMINDS_upstream.yml | 9 ++++++---
 1 file changed, 6 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/openMINDS_upstream.yml b/.github/workflows/openMINDS_upstream.yml
index 0dfb5575..cf4394bc 100644
--- a/.github/workflows/openMINDS_upstream.yml
+++ b/.github/workflows/openMINDS_upstream.yml
@@ -1,8 +1,11 @@
 name: openMINDS_upstream
 
-on: 
-  - push
-  - workflow_dispatch
+on:
+  push:
+    branches:
+      - main
+      - pipeline
+  workflow_dispatch:
   
 jobs:
   build:

From 2cc9e229865e80ea591190233af71c10e70eae95 Mon Sep 17 00:00:00 2001
From: Raphael-Gazzotti <125291580+Raphael-Gazzotti@users.noreply.github.com>
Date: Thu, 19 Mar 2026 10:36:49 +0100
Subject: [PATCH 4/4] Update workflow to trigger only on 'main' branch

Removed 'pipeline' branch from push triggers.
---
 .github/workflows/openMINDS_upstream.yml | 1 -
 1 file changed, 1 deletion(-)

diff --git a/.github/workflows/openMINDS_upstream.yml b/.github/workflows/openMINDS_upstream.yml
index cf4394bc..3ac7db1c 100644
--- a/.github/workflows/openMINDS_upstream.yml
+++ b/.github/workflows/openMINDS_upstream.yml
@@ -4,7 +4,6 @@ on:
   push:
     branches:
       - main
-      - pipeline
   workflow_dispatch:
   
 jobs: