From adc47b45db52edea2d01dff5a91953eb7cc6d79c Mon Sep 17 00:00:00 2001 From: Henrik Finsberg Date: Sat, 16 May 2026 21:55:40 +0200 Subject: [PATCH] Update packages to newest vrsions --- spack_repo/scientificcomputing/packages/dolfinx_mpc/package.py | 1 + .../scientificcomputing/packages/py_adios4dolfinx/package.py | 3 +++ .../packages/py_cardiac_geometries_core/package.py | 1 + .../packages/py_cardiac_geometriesx/package.py | 1 + .../scientificcomputing/packages/py_circulation/package.py | 1 + .../scientificcomputing/packages/py_dolfinx_mpc/package.py | 1 + .../scientificcomputing/packages/py_fenicsx_ldrb/package.py | 1 + .../scientificcomputing/packages/py_fenicsx_pulse/package.py | 1 + spack_repo/scientificcomputing/packages/py_festim/package.py | 3 +++ spack_repo/scientificcomputing/packages/py_gotranx/package.py | 1 + .../scientificcomputing/packages/py_io4dolfinx/package.py | 1 + .../scientificcomputing/packages/py_mri_toolkit/package.py | 1 + spack_repo/scientificcomputing/packages/py_myokit/package.py | 1 + spack_repo/scientificcomputing/packages/py_scifem/package.py | 1 + .../scientificcomputing/packages/py_textual_image/package.py | 1 + spack_repo/scientificcomputing/packages/py_typer/package.py | 1 + .../scientificcomputing/packages/py_ukb_atlas/package.py | 1 + 17 files changed, 21 insertions(+) diff --git a/spack_repo/scientificcomputing/packages/dolfinx_mpc/package.py b/spack_repo/scientificcomputing/packages/dolfinx_mpc/package.py index 7e43094..21da810 100644 --- a/spack_repo/scientificcomputing/packages/dolfinx_mpc/package.py +++ b/spack_repo/scientificcomputing/packages/dolfinx_mpc/package.py @@ -24,6 +24,7 @@ class DolfinxMpc(CMakePackage): version("0.10.1", sha256="b44acaa6ee34672c792980ac9c544d46c6c01ab4846f354f4724da5eaeaead6e") version("0.9.3", sha256="efa312cc498e428aab44acccc9bb0c74c200eda005742de7778c8e68fa84e8df") version("0.8.1", sha256="e0254b4a1c9c1456583c1415821946b11b0b2e48dbfee6558da2bbedfe78b461") + version("0.10.5", sha256="7896d11a6b8bd2a16de59f0ef2b5466d5361e1b2733403faaabc1d8c176fd50a") # HDF5 dependency requires C in CMake depends_on("c", type="build") diff --git a/spack_repo/scientificcomputing/packages/py_adios4dolfinx/package.py b/spack_repo/scientificcomputing/packages/py_adios4dolfinx/package.py index ac232ca..c051465 100644 --- a/spack_repo/scientificcomputing/packages/py_adios4dolfinx/package.py +++ b/spack_repo/scientificcomputing/packages/py_adios4dolfinx/package.py @@ -31,6 +31,9 @@ class PyAdios4dolfinx(PythonPackage): ) version("0.9.1", sha256="4dfd8ea3d8d21566adc40a3615830e5613d215e774e7f30de6d8c88b2078b549") version("0.9.0", sha256="5a72a8bc111d848b56d6eb776d7ca5963fe41e4126a3d875304224f80f15b8f6") + version( + "0.10.0.post0", sha256="6a937ea4c622c63a00a0c6993fc89c93b13f25a5a2c0492776fec47ce3cee9d2" + ) depends_on("py-packaging", type="run") diff --git a/spack_repo/scientificcomputing/packages/py_cardiac_geometries_core/package.py b/spack_repo/scientificcomputing/packages/py_cardiac_geometries_core/package.py index c253e49..e6a68c9 100644 --- a/spack_repo/scientificcomputing/packages/py_cardiac_geometries_core/package.py +++ b/spack_repo/scientificcomputing/packages/py_cardiac_geometries_core/package.py @@ -41,6 +41,7 @@ class PyCardiacGeometriesCore(PythonPackage): version("main", branch="main") version("1.2.2", sha256="bb7a003474d2f2013dcb2190ca1d30527f1e7aee3626114083f0656dc3830b9d") + version("1.3.2", sha256="a0d6fde96541cdd0f703a1002c984a69968864559ae45f996e96e61a7287a35c") # Python version and Build backend depends_on("python@3.8:", type=("build", "run")) diff --git a/spack_repo/scientificcomputing/packages/py_cardiac_geometriesx/package.py b/spack_repo/scientificcomputing/packages/py_cardiac_geometriesx/package.py index 7f9f9b8..592eb2d 100644 --- a/spack_repo/scientificcomputing/packages/py_cardiac_geometriesx/package.py +++ b/spack_repo/scientificcomputing/packages/py_cardiac_geometriesx/package.py @@ -41,6 +41,7 @@ class PyCardiacGeometriesx(PythonPackage): version("main", branch="main") version("0.12.0", sha256="93698a5d0d8ac7751c458dde963116a9c050c6d534b45cd034aa13dd668cc904") + version("0.13.0", sha256="6af072a135e43e29f05ed66a8ad55e18ce97f689101bf0ea65613fd54728985e") # Python version and Build backend depends_on("python@3.10:", type=("build", "run")) diff --git a/spack_repo/scientificcomputing/packages/py_circulation/package.py b/spack_repo/scientificcomputing/packages/py_circulation/package.py index 7747000..56a2945 100644 --- a/spack_repo/scientificcomputing/packages/py_circulation/package.py +++ b/spack_repo/scientificcomputing/packages/py_circulation/package.py @@ -41,6 +41,7 @@ class PyCirculation(PythonPackage): version("main", branch="main") version("0.2.1", sha256="7198386d06d0ebd00ec275c82592700eb2f5b2f1f5e1564e0b1c3baad8ddd934") + version("0.3.1", sha256="266f722295a215164ee3d053a92ce98ce6aac8b2aac7acbbe6b70967ae83a8e5") # Python version and Build backend depends_on("python@3.11:", type=("build", "run")) diff --git a/spack_repo/scientificcomputing/packages/py_dolfinx_mpc/package.py b/spack_repo/scientificcomputing/packages/py_dolfinx_mpc/package.py index dd75ffa..29e6854 100644 --- a/spack_repo/scientificcomputing/packages/py_dolfinx_mpc/package.py +++ b/spack_repo/scientificcomputing/packages/py_dolfinx_mpc/package.py @@ -24,6 +24,7 @@ class PyDolfinxMpc(PythonPackage): version("0.10.1", sha256="b44acaa6ee34672c792980ac9c544d46c6c01ab4846f354f4724da5eaeaead6e") version("0.9.3", sha256="efa312cc498e428aab44acccc9bb0c74c200eda005742de7778c8e68fa84e8df") version("0.8.1", sha256="e0254b4a1c9c1456583c1415821946b11b0b2e48dbfee6558da2bbedfe78b461") + version("0.10.5", sha256="7896d11a6b8bd2a16de59f0ef2b5466d5361e1b2733403faaabc1d8c176fd50a") variant("numba", default=False, description="numba support") diff --git a/spack_repo/scientificcomputing/packages/py_fenicsx_ldrb/package.py b/spack_repo/scientificcomputing/packages/py_fenicsx_ldrb/package.py index bd06274..8c8e72a 100644 --- a/spack_repo/scientificcomputing/packages/py_fenicsx_ldrb/package.py +++ b/spack_repo/scientificcomputing/packages/py_fenicsx_ldrb/package.py @@ -20,6 +20,7 @@ class PyFenicsxLdrb(PythonPackage): version("main", branch="main") version("0.1.17", sha256="19ce4660b9711d2efb2f9109d0bc6380eb9f2359a43f8f85f4207ee63f79f30c") + version("0.1.19", sha256="baf593da0ca38e7dfdad807bd62a1ff411dc86a0c094ae978cff2ec055f6c2e2") depends_on("python@3.10:", type=("build", "run")) diff --git a/spack_repo/scientificcomputing/packages/py_fenicsx_pulse/package.py b/spack_repo/scientificcomputing/packages/py_fenicsx_pulse/package.py index 1e4e033..01ed7ff 100644 --- a/spack_repo/scientificcomputing/packages/py_fenicsx_pulse/package.py +++ b/spack_repo/scientificcomputing/packages/py_fenicsx_pulse/package.py @@ -20,6 +20,7 @@ class PyFenicsxPulse(PythonPackage): version("main", branch="main") version("0.6.0", sha256="fddfb2fa554e6537b8205a1a7806549fbbd5b55cb913338387f54f27bef87818") + version("0.6.1", sha256="3f335f502f40e4e0d640b981f4add3abcd642e27aa911d9c72b4baafeb04b5b7") variant( "cardiac-geometries", default=True, description="Add cardiac geometries as a dependency" diff --git a/spack_repo/scientificcomputing/packages/py_festim/package.py b/spack_repo/scientificcomputing/packages/py_festim/package.py index 562643e..2824b09 100644 --- a/spack_repo/scientificcomputing/packages/py_festim/package.py +++ b/spack_repo/scientificcomputing/packages/py_festim/package.py @@ -21,6 +21,9 @@ class PyFestim(PythonPackage): license("Apache-2.0", checked_by="jorgensd") version("main", branch="fenicsx") + version( + "2.0-alpha.8", sha256="b12144204e6d1d887a9c0cfadafbfaa87aa6b16fc09f0884df72fe6d0d56dc38" + ) version( "2.0-beta.2post1", sha256="d1ebca798f975480289b8027c5ff87a8bd3b21b8931f09660614fdd9d80c7819", diff --git a/spack_repo/scientificcomputing/packages/py_gotranx/package.py b/spack_repo/scientificcomputing/packages/py_gotranx/package.py index b1f02f9..3a16ad4 100644 --- a/spack_repo/scientificcomputing/packages/py_gotranx/package.py +++ b/spack_repo/scientificcomputing/packages/py_gotranx/package.py @@ -41,6 +41,7 @@ class PyGotranx(PythonPackage): version("main", branch="main") version("1.5.1", sha256="5386876d6cd6f4465a8288a27a7fd44a98116e5b7887173578873371a6a4d3a6") + version("1.6.1", sha256="43602fb6782b33774a119d35545a99ad27cf9a76fbe919844a1f42b5e20cc1e8") # Python version and Build backend depends_on("python@3.9:", type=("build", "run")) diff --git a/spack_repo/scientificcomputing/packages/py_io4dolfinx/package.py b/spack_repo/scientificcomputing/packages/py_io4dolfinx/package.py index 55ffed4..1667153 100644 --- a/spack_repo/scientificcomputing/packages/py_io4dolfinx/package.py +++ b/spack_repo/scientificcomputing/packages/py_io4dolfinx/package.py @@ -26,6 +26,7 @@ class PyIo4dolfinx(PythonPackage): version("main", branch="main") version("1.1.2", sha256="592954e9ef4942fef966cba49b131213ff105fa473dd26912c1d2a22fb2392d3") version("1.1.0", sha256="3641d72083858d5ae0672a16cb11dc6fd792a117cbc2281be307ffc47a91fcb2") + version("1.2.0", sha256="2da5fb02998cef9203c2da75a6280231ff66bc044557e6816148e968fcbf53b7") variant("adios2", default=True, description="ADIOS2 backend support") variant("h5py", default=True, description="H5Py backend support") diff --git a/spack_repo/scientificcomputing/packages/py_mri_toolkit/package.py b/spack_repo/scientificcomputing/packages/py_mri_toolkit/package.py index fce3dc9..6e5bfc0 100644 --- a/spack_repo/scientificcomputing/packages/py_mri_toolkit/package.py +++ b/spack_repo/scientificcomputing/packages/py_mri_toolkit/package.py @@ -39,6 +39,7 @@ class PyMriToolkit(PythonPackage): version("main", branch="main") version("0.2.0", sha256="9fa0c7a22ba7ecc0bfacc72d5a4b21c54261f32222faa24ae8329acfd44a42e8") version("0.1.0", sha256="729d6094ed6edbe513905cecb4609b5238d04e360c68c632ec32fba97bbd80b9") + version("0.4.1", sha256="8f7995ecab3f0c020a28ed3c440ea42cc049f4adcc7fb3d5ea5f379d15ae603f") # FIXME: Only add the python/pip/wheel dependencies if you need specific versions # or need to change the dependency type. Generic python/pip/wheel dependencies are diff --git a/spack_repo/scientificcomputing/packages/py_myokit/package.py b/spack_repo/scientificcomputing/packages/py_myokit/package.py index 4f51c1e..b3592d5 100644 --- a/spack_repo/scientificcomputing/packages/py_myokit/package.py +++ b/spack_repo/scientificcomputing/packages/py_myokit/package.py @@ -41,6 +41,7 @@ class PyMyokit(PythonPackage): version("main", branch="main") version("1.39.1", sha256="8282b145cd18eb8f2efa517591716d69ab0d6ec18dd09db9a9fab6a0fb39618b") + version("1.39.2", sha256="df328838943062fb9e0f0c34db09e55afdf4ca182f5e373df40bae0ed4a3c6cf") # Python version and Build backend depends_on("python@3.9:", type=("build", "run")) diff --git a/spack_repo/scientificcomputing/packages/py_scifem/package.py b/spack_repo/scientificcomputing/packages/py_scifem/package.py index a77c7aa..03c1449 100644 --- a/spack_repo/scientificcomputing/packages/py_scifem/package.py +++ b/spack_repo/scientificcomputing/packages/py_scifem/package.py @@ -28,6 +28,7 @@ class PyScifem(PythonPackage): version("0.6.0", sha256="548c9af8997537bc6830c898a9ffe7007dda16b5e40f3240c97e646cfd0a30b3") version("0.5.0", sha256="1e5978ab97889c2d6bad80e375c9db1b050bfb68c197eada17928e6908f15372") version("0.4.0", sha256="c4494008c974c3303de7d28d40e038478c4fc1c7c24b7117305bd552a2a1c5a4") + version("0.17.0", sha256="3abf12d0bc10e19285bb64af7bbf8ecb19ecb8ba4c7faa5a4519da81c5471f94") variant("adios2", default=False, description="ADIOS2 support") variant("petsc", default=False, description="PETSc support") diff --git a/spack_repo/scientificcomputing/packages/py_textual_image/package.py b/spack_repo/scientificcomputing/packages/py_textual_image/package.py index 4b2c3f7..394d22e 100644 --- a/spack_repo/scientificcomputing/packages/py_textual_image/package.py +++ b/spack_repo/scientificcomputing/packages/py_textual_image/package.py @@ -35,6 +35,7 @@ class PyTextualImage(PythonPackage): maintainers("finsberg") version("0.8.5", sha256="43d4c0026a4f21fa255f41eac7b0fc1f7410a4c7bc9bf95b908bec901b0a8c3a") + version("0.12.0", sha256="fdd0b5ff9c8a99740bc360a99ce014d563fa97d07a5b49b472470809f57c0a74") # FIXME: Only add the python/pip/wheel dependencies if you need specific versions # or need to change the dependency type. Generic python/pip/wheel dependencies are diff --git a/spack_repo/scientificcomputing/packages/py_typer/package.py b/spack_repo/scientificcomputing/packages/py_typer/package.py index 9b8a42e..b8faee9 100644 --- a/spack_repo/scientificcomputing/packages/py_typer/package.py +++ b/spack_repo/scientificcomputing/packages/py_typer/package.py @@ -16,6 +16,7 @@ class PyTyper(PythonPackage): license("MIT", checked_by="finsberg") version("0.24.1", sha256="e39b4732d65fbdcde189ae76cf7cd48aeae72919dea1fdfc16593be016256b45") + version("0.25.1", sha256="9616eb8853a09ffeabab1698952f33c6f29ffdbceb4eaeecf571880e8d7664cc") depends_on("python@3.10:", type=("build", "run")) depends_on("py-pdm-backend", type="build") diff --git a/spack_repo/scientificcomputing/packages/py_ukb_atlas/package.py b/spack_repo/scientificcomputing/packages/py_ukb_atlas/package.py index 43b2443..8cde1fe 100644 --- a/spack_repo/scientificcomputing/packages/py_ukb_atlas/package.py +++ b/spack_repo/scientificcomputing/packages/py_ukb_atlas/package.py @@ -41,6 +41,7 @@ class PyUkbAtlas(PythonPackage): version("main", branch="main") version("1.2.3", sha256="65bed1747a9e47f59300d39336af2282bb6fe5a6dc6dd7a7038dd6ba06af7333") + version("1.3.1", sha256="20e789041c185d34392e64b5e34365616f9b743cfcb56a4b66e0d9846377b23b") # Python version and Build backend depends_on("python@3.10:", type=("build", "run"))