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Update mcot.cpp #7

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Update mcot.cpp #7

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2 changes: 1 addition & 1 deletion src/anchor_vs_many_partners/mcot.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -857,7 +857,7 @@ int main(int argc, char *argv[])
int height_permut = 100, size_min_permut = 200000, size_max_permut = 300000; //50000 150000 25 parametry permutacii
double pvalue = 0.0005, pvalue_mult = 1.5, dpvalue = 0.0000005; // 0.0005 1.5 parametry dlya porogov matric
int mot_anchor = 0;// 0 = pwm from file >0 pwm from pre-computed database
int s_overlap_min = 6, s_ncycle_small = 1000, s_ncycle_large = 10000, reinit_permut = 25;//for permutation(motif_comparison) min_length_of_alignment, no. of permutation (test & detailed)
int s_overlap_min = 6, s_ncycle_small = 1000, s_ncycle_large = 10000, reinit_permut = 40;//for permutation(motif_comparison) min_length_of_alignment, no. of permutation (test & detailed)
double s_granul = 0.001;//for permutation(motif_comparison) okruglenie 4astotnyh matric
strcpy(file_pfm_anchor, argv[2]);
strcpy(partner_db, argv[3]); //hs_core, hs_full, mm_core, mm_full, dapseq
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