chore(main): release 0.1.0

[github-actions]

🤖 I have created a release beep boop

0.1.0 (2026-02-19)

Features

• add endpoint to bulk insert specimens, update sample table to only require bpa_sample_id for derived samples (248de31)
• add endpoint to look up specimen by specimen_id + tax_id (96910e8)
• add function to determine data_type for an assembly, and a matching endpoint (c1f54a8)
• add new organism fields (6bbef3a)
• add new organism fields and improve broker endpoints (cc804f5)
• add POST /claim endpoint to lease individual sample/experiments/reads objs (no organism_key required) (da14705)
• add specimen-level samples (0d61033)
• add specimen/derived samples to the db schema, models, endpoints (bf2840c)
• add uniqueness constraint on tax_id + specimen_id for specimen samples (2dcbf1a)
• generate assembly manifest (for pacbio and hi-C reads) (665a633)
• implement genome notes with versioning (b865bac)
• improve error messaging for bulk-insert endpoints (c5aca3e)
• redesign genome notes and assemblies (dd7115e)
• update assembly models to meet new requirements (ee75d58)
• update assembly models to meet new(est) requirements (f936379)

Bug Fixes

• address codepilot review (9f8253b)
• Dockerfile (01f1be5)
• enforce 72-byte limit at user create/update (44b9bbb)
• enforce expiry of leased items on before new lease request (91dbbbc)
• fix db readiness probe (175f9d2)
• import if an experiment already exists in the db, still add any valid related runs to the db (b053cee)
• improve errors returned from ingestion endpoints (32161f4)
• improve test for the 72 byte password limitation in bcrypt (974b29d)
• rename testing files (30bb35d)
• resolve passlib + bcrypt incompatibility (6ad8cd0)
• update references to organism key, and resolve conflicting status field (6b3bdc4)
• update tests (f85fe77)

Documentation

• add PR template for repo (7a4d695)

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