This repository contains material for the European Bioconductor annual conference. View the conference web site.

Setup

Please follow best practices by previewing changes locally.

1. Make sure that ruby and bundler are installed, following the 'Requirements' section of GitHub's documentation. Use Ruby 3.6.5.

2. Clone the repository and switch to the docs/ directory

    git clone git@github.com:Bioconductor/EuroBioc2020
    cd EuroBioc2020/docs
   

3. Install or update bundler to install the ruby pre-requisities.

    gem install --user-install bundler
    # If the installer complains, add the suggested \$PATH\_TO\_RUBY/bin
    # directory to your ~/.bash_profile or ~/.bashrc or similar.
   

4. Install ruby pre-requisites.

    bundle config set path 'vendor/bundle'     # once only; references Gemfile
   

5. Update installation according to Gemfile

    bundle install
   

6. Execute the jekyll server

    bundle exec jekyll serve
   

   and view the results at https://localhost:4000

Adding content to existing pages

Edit or add material as markdown files in the docs/ directory. Please wrap lines to 80 character width and aim for simple markdown rather than elaborate html or other content.

New pages

Add new markdown files in the docs/ directory. Files should start with

---
layout: default
---

{% include header.md %}

Followed by a level 2 (##) heading.

Edit _include/navigation.html to link the page to the navigation sidebar.