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@CoBrALab

Computational Brain Anatomy Laboratory

Computational Brain Anatomy Laboratory, located in the CIC at the Douglas Institute, McGill University

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  1. atlases atlases Public

    Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space

    Python 34 21

  2. optimized_antsMultivariateTemplateConstruction optimized_antsMultivariateTemplateConstruction Public

    A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support

    Shell 36 11

  3. AllenHumanGeneMNI AllenHumanGeneMNI Public

    Careful multispectral registration of the Allen Human Brain Gene Samples in MNI ICBM NLIN SYM 09c space

    Jupyter Notebook 9

  4. MAGeTBrain-nextflow MAGeTBrain-nextflow Public

    Nextflow

  5. RABIES RABIES Public

    fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/

    Python 51 22

  6. libBIDS.sh libBIDS.sh Public

    Shell 21 3

Repositories

Showing 10 of 52 repositories
  • qbatch Public
    CoBrALab/qbatch’s past year of commit activity
    Python 33 Unlicense 13 27 3 Updated Feb 23, 2026
  • RABIES Public

    fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/

    CoBrALab/RABIES’s past year of commit activity
    Python 51 22 53 7 Updated Feb 19, 2026
  • libBIDS.sh Public
    CoBrALab/libBIDS.sh’s past year of commit activity
    Shell 21 MIT 3 10 1 Updated Feb 19, 2026
  • synthstrip_N3 Public

    A preprocessing tool for human T1w MRIs

    CoBrALab/synthstrip_N3’s past year of commit activity
    Shell 2 1 8 2 Updated Feb 13, 2026
  • WMH_patho_UKB Public
    CoBrALab/WMH_patho_UKB’s past year of commit activity
    R 1 0 0 1 Updated Feb 12, 2026
  • optimized_antsMultivariateTemplateConstruction Public

    A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support

    CoBrALab/optimized_antsMultivariateTemplateConstruction’s past year of commit activity
    Shell 36 11 38 2 Updated Feb 12, 2026
  • make_slice_images Public
    CoBrALab/make_slice_images’s past year of commit activity
    Perl 2 0 4 0 Updated Feb 11, 2026
  • preclinical_N3 Public
    CoBrALab/preclinical_N3’s past year of commit activity
    Shell 1 0 4 1 Updated Feb 11, 2026
  • MAGeTBrain-nextflow Public
    CoBrALab/MAGeTBrain-nextflow’s past year of commit activity
    Nextflow 0 0 14 0 Updated Feb 6, 2026
  • simpleitk_timeseries_motion_correction Public
    CoBrALab/simpleitk_timeseries_motion_correction’s past year of commit activity
    Python 1 2 8 1 Updated Feb 5, 2026
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