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Set reslice dir default value to output dir #703

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Merged
yousefmoazzam merged 1 commit into from
Apr 2, 2026
Merged

Set reslice dir default value to output dir #703

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7 changes: 3 additions & 4 deletions httomo/cli.py
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Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
from contextlib import AbstractContextManager, nullcontext
from datetime import datetime
from os import PathLike
from pathlib import Path, PurePath
import sys
import tempfile
Expand Down Expand Up @@ -278,7 +279,7 @@ def run(
max_memory,
monitor,
monitor_output,
reslice_dir,
reslice_dir if reslice_dir is not None else httomo.globals.run_out_dir,
save_snapshots,
)
else:
Expand Down Expand Up @@ -418,7 +419,7 @@ def execute_high_throughput_run(
max_memory: str,
monitor: List[str],
monitor_output: TextIO,
reslice_dir: Union[Path, None],
reslice_dir: PathLike,
save_snapshots: bool,
) -> None:
# we use half the memory for blocks since we typically have inputs/output
Expand All @@ -429,8 +430,6 @@ def execute_high_throughput_run(
# Run the pipeline using Taskrunner, with temp dir or reslice dir
mon = make_monitors(monitor, global_comm)
ctx: AbstractContextManager = nullcontext(reslice_dir)
if reslice_dir is None:
ctx = tempfile.TemporaryDirectory()
with ctx as tmp_dir:
runner = TaskRunner(
pipeline,
Expand Down
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