fix: allow-list files in fake home directory for Gemini CLI#395
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This change modifies
gemini_cli.pyto automatically add the fake_home directory to the includeDirectories list in settings.json under the context section. This allow-lists the fake home directory to be access by built-in tools such as read_file, ensuring that the Gemini CLI can still access files within it (such as those in skills) when resuming a session.