ci: implement notebook regression testing pipeline#4
Merged
Conversation
Injects `nbmake` into the `dev` dependency group in `pyproject.toml`. This is required to enable regression testing of Jupyter notebooks via the `pytest` plugin system within the `uv` environment.
- Updates `.github/workflows/ci.yml` to execute `pytest --nbmake` on specific targets. - Targets: `02_instrument_analysis.ipynb` and `04_transfer_analysis.ipynb`. - Excludes: Acquisition notebooks (01, 03) to prevent hanging on hardware triggers/IO. - Sets a 600s timeout to accommodate heavier data processing in analysis cells.
JacksonFergusonDev
force-pushed
the
tests
branch
from
a6bcfa9 to
4ff700e
Compare
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
1 participant
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
Integrates
nbmakeinto the CI pipeline to enforce execution validity on analysis-focused Jupyter notebooks.Changes
pyproject.toml: Addednbmaketo thedevdependency group..github/workflows/ci.yml: Added aRun Notebook Regression Testsstep.Implementation Details
The pipeline now executes the following notebooks:
oscilloscope-rp2040/notebooks/02_instrument_analysis.ipynboscilloscope-rp2040/notebooks/04_transfer_analysis.ipynbExclusions:
Acquisition notebooks (
01_instrument_acquisition.ipynb,03_transfer_acquisition.ipynb) are explicitly excluded. These require physical hardware (RP2040) and external triggers, which would cause the runner to hang or fail on I/O.