Skip to content

Various updates for new release - collapse function, auto axis, code modularisation#9

Merged
KatyBrown merged 59 commits intomainfrom
new_release
Jul 21, 2025
Merged

Various updates for new release - collapse function, auto axis, code modularisation#9
KatyBrown merged 59 commits intomainfrom
new_release

Conversation

@KatyBrown
Copy link
Owner

Added several new features and debugged existing features.

  • Added the collapse function, which will collapse clades where all leaf names contain a specific string
collapse_after
  • Added the auto_ax function, which now runs as default and adjusts the axis limits to best display the phylogeny. This option can be turned off for manual control of the position of the tree on the axis.

  • Modularised the code into the draw_tree, amend_tree and get_boxes module files

  • Various minor updates to tests and documentation,.

@KatyBrown KatyBrown merged commit 99a021f into main Jul 21, 2025
12 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant