Skip to content
Open
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion DESCRIPTION
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@ Imports:
R.matlab
Suggests:
covr,
testthat,
testthat (>= 3.1.6),
knitr,
rmarkdown
License: GPL-3 | file LICENSE
Expand Down
10 changes: 5 additions & 5 deletions tests/testthat/test-load-data.R
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ test_that("test that it is possible to load multiple LANS summaries", {
load_LANS_summary (analysis = c("analysis1", "analysis2", "analysis3"),
base_dir = folder, load_zstacks = FALSE),
".*read successfully.*Z-stacks were not loaded")
expect_silent(
expect_no_message(
data <- load_LANS_summary (analysis = c("analysis1", "analysis2", "analysis3"),
base_dir = folder, load_zstacks = FALSE, quiet = TRUE))

Expand All @@ -40,7 +40,7 @@ test_that("test that it is possible to load multiple LANS summaries", {
load_LANS_summary (analysis = c("analysis1", "analysis2", "analysis3"),
base_dir = folder, load_zstacks = TRUE),
".*read successfully.*Z-stacks were loaded")
expect_silent(
expect_no_message(
data <- load_LANS_summary (analysis = c("analysis1", "analysis2", "analysis3"),
base_dir = folder, load_zstacks = TRUE, quiet = TRUE))

Expand All @@ -55,7 +55,7 @@ test_that("test that it is possible to load multiple LANS summaries", {
"17.38", "192.93", "0.83", "353", "2.45"))

# additional information
expect_silent(
expect_no_message(
data <- load_LANS_summary (analysis = c("analysis1", "analysis2", "analysis3"),
information = c("run1", "run2", "run3"),
date = as.Date(c("2015-01-01", "2016-02-25", "2017-03-04")),
Expand All @@ -78,8 +78,8 @@ test_that("test that it is possible to load LANS maps", {

expect_true(file.exists(folder <- system.file("extdata", "nanosims_data", package = "lans2r")))

expect_silent(maps <- load_LANS_maps (analysis = c("analysis1", "analysis2", "analysis3"),
base_dir = folder, quiet = TRUE))
expect_no_message(maps <- load_LANS_maps (analysis = c("analysis1", "analysis2", "analysis3"),
base_dir = folder, quiet = TRUE))

# check data
expect_equal(nrow(maps), as.integer(256^2 * 4 * 3))
Expand Down