fix: Fix/connection pool#50
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…pool # Conflicts: # common/dao/build.sbt
…es the singleton between test suites
… Packages (apache#4902) <!-- Thanks for sending a pull request (PR)! Here are some tips for you: 1. If this is your first time, please read our contributor guidelines: [Contributing to Texera](https://github.com/apache/texera/blob/main/CONTRIBUTING.md) 2. Ensure you have added or run the appropriate tests for your PR 3. If the PR is work in progress, mark it a draft on GitHub. 4. Please write your PR title to summarize what this PR proposes, we are following Conventional Commits style for PR titles as well. 5. Be sure to keep the PR description updated to reflect all changes. --> ### What changes were proposed in this PR? <!-- Please clarify what changes you are proposing. The purpose of this section is to outline the changes. Here are some tips for you: 1. If you propose a new API, clarify the use case for a new API. 2. If you fix a bug, you can clarify why it is a bug. 3. If it is a refactoring, clarify what has been changed. 3. It would be helpful to include a before-and-after comparison using screenshots or GIFs. 4. Please consider writing useful notes for better and faster reviews. --> This PR is an extension of PR [apache#4484](apache#4484). Previously, we introduced support for creating Python Virtual Environments (PVEs) with system-level dependencies preinstalled. This PR builds on that foundation by enabling users to install custom Python packages within a PVE. In some cases, installing a user package may overwrite system-level packages. For this reason, System package versions are locked to prevent these conflicts. Some duplicate lines of code (previously introduced in PR [apache#4484](apache#4484)) were removed from PveManager to improve clarity and reduce redundancy. ### Any related issues, documentation, discussions? <!-- Please use this section to link other resources if not mentioned already. 1. If this PR fixes an issue, please include `Fixes apache#1234`, `Resolves apache#1234` or `Closes apache#1234`. If it is only related, simply mention the issue number. 2. If there is design documentation, please add the link. 3. If there is a discussion in the mailing list, please add the link. --> This change is part of ongoing efforts to support environment isolation and reproducibility within Texera. Related issue includes [apache#4296](apache#4296). This PR closes sub-issue [apache#4465](apache#4465). A GitHub CI sync check between `requirements.txt` and `system-requirements-lock.txt` will be added in a follow-up PR. Tracking issue: apache#5034. ### How was this PR tested? <!-- If tests were added, say they were added here. Or simply mention that if the PR is tested with existing test cases. Make sure to include/update test cases that check the changes thoroughly including negative and positive cases if possible. If it was tested in a way different from regular unit tests, please clarify how you tested step by step, ideally copy and paste-able, so that other reviewers can test and check, and descendants can verify in the future. If tests were not added, please describe why they were not added and/or why it was difficult to add. --> Tested Manually and PveResourceSpec test file updated. To test: 1. On CU click "+" Python Environments. 2. Input environment name. 3. Input package name and version. 4. Click "OK" and wait for pip logs. To test system dependency conflit management, install the following packages: - Scanpy 1.11.1 -> Successful - Tensorflow 2.16.1 -> Unsuccessful because of system level dependency conflict ### Was this PR authored or co-authored using generative AI tooling? <!-- If generative AI tooling has been used in the process of authoring this PR, please include the phrase: 'Generated-by: ' followed by the name of the tool and its version. If no, write 'No'. Please refer to the [ASF Generative Tooling Guidance](https://www.apache.org/legal/generative-tooling.html) for details. --> Co-authored using: ChatGPT (OpenAI)
### What changes were proposed in this PR? Adds the website documentation folder into the main repository under a new `docs/` folder. The docs cover overview, getting started, tutorials, concepts, the operator reference, contribution guidelines, examples, and security ### Any related issues, documentation, or discussions? Closes: apache#4984 ### How was this PR tested? copy pasted from and did a diff check against the Apache Texera website [GitHub Repo](https://github.com/apache/incubator-texera-site) ### Was this PR authored or co-authored using generative AI tooling? No
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What changes were proposed in this PR?
Any related issues, documentation, discussions?
How was this PR tested?
Was this PR authored or co-authored using generative AI tooling?