GEOPY-425: Crash on Zarr file shape for tiled inversions with disk storage

environments/py-3.10-linux-64-dev.conda.lock.yml

@@ -15,8 +15,8 @@ dependencies:
   - argon2-cffi-bindings=25.1.0=py310h7c4b9e2_1
   - arrow=1.3.0=pyhd8ed1ab_1
   - asciitree=0.3.3=py_2
-  - astroid=3.3.11=py310hff52083_1
-  - asttokens=3.0.0=pyhd8ed1ab_1
+  - astroid=4.0.1=py310hff52083_0
+  - asttokens=2.4.1=pyhd8ed1ab_0
   - async-lru=2.0.5=pyh29332c3_0
   - attrs=25.4.0=pyh71513ae_0
   - babel=2.17.0=pyhd8ed1ab_0
@@ -33,8 +33,8 @@ dependencies:
   - cached-property=1.5.2=hd8ed1ab_1
   - cached_property=1.5.2=pyha770c72_1
   - certifi=2025.10.5=pyhd8ed1ab_0
-  - cffi=2.0.0=py310h34a4b09_0
-  - charset-normalizer=3.4.3=pyhd8ed1ab_0
+  - cffi=1.17.1=py310h8deb56e_0
+  - charset-normalizer=3.4.4=pyhd8ed1ab_0
   - click=8.3.0=pyh707e725_0
   - cloudpickle=3.1.1=pyhd8ed1ab_0
   - colorama=0.4.6=pyhd8ed1ab_1
@@ -49,7 +49,7 @@ dependencies:
   - decorator=5.2.1=pyhd8ed1ab_0
   - defusedxml=0.7.1=pyhd8ed1ab_0
   - dill=0.4.0=pyhd8ed1ab_0
-  - discretize=0.11.3=py310ha2bacc8_0
+  - discretize=0.11.3=py310hc563356_1
   - distributed=2025.3.0=pyhd8ed1ab_0
   - docutils=0.19=py310hff52083_1
   - exceptiongroup=1.3.0=pyhd8ed1ab_0
@@ -70,17 +70,17 @@ dependencies:
   - httpx=0.28.1=pyhd8ed1ab_0
   - hyperframe=6.1.0=pyhd8ed1ab_0
   - icu=75.1=he02047a_0
-  - idna=3.10=pyhd8ed1ab_1
+  - idna=3.11=pyhd8ed1ab_0
   - imagesize=1.4.1=pyhd8ed1ab_0
   - importlib-metadata=8.7.0=pyhe01879c_1
   - importlib_metadata=8.7.0=h40b2b14_1
   - iniconfig=2.0.0=pyhd8ed1ab_1
-  - ipykernel=6.30.1=pyh82676e8_0
+  - ipykernel=7.0.1=pyha191276_0
   - ipython=8.37.0=pyh8f84b5b_0
   - ipython_genutils=0.2.0=pyhd8ed1ab_2
   - ipywidgets=7.8.5=pyhd8ed1ab_0
   - isoduration=20.11.0=pyhd8ed1ab_1
-  - isort=6.1.0=pyhd8ed1ab_0
+  - isort=7.0.0=pyhd8ed1ab_0
   - jedi=0.19.2=pyhd8ed1ab_1
   - jinja2=3.1.6=pyhd8ed1ab_0
   - joblib=1.5.2=pyhd8ed1ab_0
@@ -111,28 +111,28 @@ dependencies:
   - ld_impl_linux-64=2.44=ha97dd6f_2
   - lerc=4.0.0=h0aef613_1
   - libaec=1.1.4=h3f801dc_0
-  - libblas=3.9.0=36_h5875eb1_mkl
+  - libblas=3.9.0=37_h5875eb1_mkl
   - libbrotlicommon=1.1.0=hb03c661_4
   - libbrotlidec=1.1.0=hb03c661_4
   - libbrotlienc=1.1.0=hb03c661_4
-  - libcblas=3.9.0=36_hfef963f_mkl
+  - libcblas=3.9.0=37_hfef963f_mkl
   - libcurl=8.14.1=h332b0f4_0
   - libdeflate=1.24=h86f0d12_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libedit=3.1.20250104=pl5321h7949ede_0
   - libev=4.33=hd590300_2
   - libexpat=2.7.1=hecca717_0
-  - libffi=3.4.6=h2dba641_1
+  - libffi=3.5.2=h9ec8514_0
   - libfreetype=2.14.1=ha770c72_0
   - libfreetype6=2.14.1=h73754d4_0
-  - libgcc=15.2.0=h767d61c_6
-  - libgcc-ng=15.2.0=h69a702a_6
-  - libgfortran=15.2.0=h69a702a_6
-  - libgfortran5=15.2.0=hcd61629_6
+  - libgcc=15.2.0=h767d61c_7
+  - libgcc-ng=15.2.0=h69a702a_7
+  - libgfortran=15.2.0=h69a702a_7
+  - libgfortran5=15.2.0=hcd61629_7
   - libhwloc=2.12.1=default_h7f8ec31_1002
   - libiconv=1.18=h3b78370_2
   - libjpeg-turbo=3.1.0=hb9d3cd8_0
-  - liblapack=3.9.0=36_h5e43f62_mkl
+  - liblapack=3.9.0=37_h5e43f62_mkl
   - liblzma=5.8.1=hb9d3cd8_2
   - libnghttp2=1.67.0=had1ee68_0
   - libnsl=2.0.1=hb9d3cd8_1
@@ -142,8 +142,8 @@ dependencies:
   - libspatialindex=2.0.0=he02047a_0
   - libsqlite=3.50.4=h0c1763c_0
   - libssh2=1.11.1=hcf80075_0
-  - libstdcxx=15.2.0=h8f9b012_6
-  - libstdcxx-ng=15.2.0=h4852527_6
+  - libstdcxx=15.2.0=h8f9b012_7
+  - libstdcxx-ng=15.2.0=h4852527_7
   - libtiff=4.7.1=h8261f1e_0
   - libuuid=2.41.2=he9a06e4_0
   - libwebp-base=1.6.0=hd42ef1d_0
@@ -153,7 +153,7 @@ dependencies:
   - libxml2-16=2.15.0=ha9997c6_1
   - libzlib=1.3.1=hb9d3cd8_2
   - linkify-it-py=2.0.3=pyhd8ed1ab_1
-  - llvm-openmp=21.1.2=h4922eb0_3
+  - llvm-openmp=21.1.3=h4922eb0_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markdown-it-py=2.2.0=pyhd8ed1ab_0
   - markupsafe=3.0.3=py310h3406613_0
@@ -165,7 +165,7 @@ dependencies:
   - metis=5.1.0=hd0bcaf9_1007
   - mistune=3.1.4=pyhcf101f3_0
   - mkl=2024.2.2=ha770c72_17
-  - msgpack-python=1.1.1=py310h03d9f68_1
+  - msgpack-python=1.1.2=py310h03d9f68_0
   - mumps-include=5.7.3=h82cca05_10
   - mumps-seq=5.7.3=h06cbf8f_10
   - munkres=1.1.4=pyhd8ed1ab_1
@@ -195,7 +195,7 @@ dependencies:
   - pickleshare=0.7.5=pyhd8ed1ab_1004
   - pillow=10.3.0=py310hebfe307_1
   - pip=25.2=pyh8b19718_0
-  - platformdirs=4.4.0=pyhcf101f3_0
+  - platformdirs=4.5.0=pyhcf101f3_0
   - pluggy=1.6.0=pyhd8ed1ab_0
   - prometheus_client=0.23.1=pyhd8ed1ab_0
   - prompt-toolkit=3.0.52=pyha770c72_0
@@ -206,18 +206,18 @@ dependencies:
   - pybtex=0.25.1=pyhd8ed1ab_0
   - pybtex-docutils=1.0.3=py310hff52083_3
   - pycparser=2.22=pyh29332c3_1
-  - pydantic=2.11.10=pyh3cfb1c2_0
-  - pydantic-core=2.33.2=py310hbcd0ec0_0
+  - pydantic=2.12.1=pyh3cfb1c2_0
+  - pydantic-core=2.41.3=py310hd8f68c5_0
   - pydata-sphinx-theme=0.15.4=pyhd8ed1ab_0
   - pydiso=0.1.2=py310h69a6472_0
   - pygments=2.19.2=pyhd8ed1ab_0
-  - pylint=3.3.9=pyhcf101f3_0
+  - pylint=4.0.0=pyhcf101f3_0
   - pymatsolver=0.3.1=pyh48887ae_201
   - pyparsing=3.2.5=pyhcf101f3_0
   - pysocks=1.7.1=pyha55dd90_7
   - pytest=8.4.2=pyhd8ed1ab_0
   - pytest-cov=7.0.0=pyhcf101f3_1
-  - python=3.10.18=hd6af730_0_cpython
+  - python=3.10.19=hd994cfb_1_cpython
   - python-dateutil=2.9.0.post0=pyhe01879c_2
   - python-fastjsonschema=2.21.2=pyhe01879c_0
   - python-json-logger=2.0.7=pyhd8ed1ab_0
@@ -229,7 +229,7 @@ dependencies:
   - pyzmq=27.1.0=py310h4f33d48_0
   - readline=8.2=h8c095d6_2
   - readthedocs-sphinx-ext=2.2.5=pyhd8ed1ab_1
-  - referencing=0.36.2=pyh29332c3_0
+  - referencing=0.37.0=pyhcf101f3_0
   - requests=2.32.5=pyhd8ed1ab_0
   - rfc3339-validator=0.1.4=pyhd8ed1ab_1
   - rfc3986-validator=0.1.1=pyh9f0ad1d_0
@@ -262,7 +262,7 @@ dependencies:
   - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_1
   - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1
   - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_1
-  - sqlalchemy=2.0.43=py310h7c4b9e2_1
+  - sqlalchemy=2.0.44=py310h7c4b9e2_0
   - stack_data=0.6.3=pyhd8ed1ab_1
   - tabulate=0.9.0=pyhd8ed1ab_2
   - tbb=2021.13.0=hb60516a_3
@@ -271,14 +271,14 @@ dependencies:
   - threadpoolctl=3.6.0=pyhecae5ae_0
   - tinycss2=1.4.0=pyhd8ed1ab_0
   - tk=8.6.13=noxft_hd72426e_102
-  - tomli=2.2.1=pyhe01879c_2
+  - tomli=2.3.0=pyhcf101f3_0
   - tomlkit=0.13.3=pyha770c72_0
   - toolz=1.0.0=pyhd8ed1ab_1
   - tornado=6.5.2=py310h7c4b9e2_1
   - tqdm=4.67.1=pyhd8ed1ab_1
   - traitlets=5.14.3=pyhd8ed1ab_1
   - trimesh=4.1.8=pyhd8ed1ab_0
-  - types-python-dateutil=2.9.0.20250822=pyhd8ed1ab_0
+  - types-python-dateutil=2.9.0.20251008=pyhd8ed1ab_0
   - typing-extensions=4.15.0=h396c80c_0
   - typing-inspection=0.4.2=pyhd8ed1ab_0
   - typing_extensions=4.15.0=pyhcf101f3_0
@@ -291,7 +291,7 @@ dependencies:
   - wcwidth=0.2.14=pyhd8ed1ab_0
   - webcolors=24.11.1=pyhd8ed1ab_0
   - webencodings=0.5.1=pyhd8ed1ab_3
-  - websocket-client=1.8.0=pyhd8ed1ab_1
+  - websocket-client=1.9.0=pyhd8ed1ab_0
   - wheel=0.45.1=pyhd8ed1ab_1
   - widgetsnbextension=3.6.10=pyhd8ed1ab_0
   - xorg-libxau=1.0.12=hb9d3cd8_0
@@ -305,10 +305,10 @@ dependencies:
   - zstandard=0.25.0=py310h139afa4_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@13980469f5548c3dcbd2bd208b232bf02a2f68ca
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@e5a08e7bfed421e16b59c318ea430aec55a2c005
+    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@ed5f5cf8cd1a3ef9c3ec13140215d4b5d3da0a31
+    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@b7e7ecdb90fb6daa40c9d7348380542fd1131994
     - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@ed6918388d6fc4062f72e471e415a1a22cc15d0d
-    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@825b0b73fcc95b7b2c9629c19ea8861222adad7e
+    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@7564c0999208f9ff8f9e3733f5ffd22da9b333ee
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-linux-64.conda.lock.yml

@@ -9,7 +9,6 @@ dependencies:
   - _openmp_mutex=4.5=4_kmp_llvm
   - annotated-types=0.7.0=pyhd8ed1ab_1
   - asciitree=0.3.3=py_2
-  - astroid=3.3.11=py310hff52083_1
   - bokeh=3.6.3=pyhd8ed1ab_0
   - brotli=1.1.0=hb03c661_4
   - brotli-bin=1.1.0=hb03c661_4
@@ -20,16 +19,15 @@ dependencies:
   - cached-property=1.5.2=hd8ed1ab_1
   - cached_property=1.5.2=pyha770c72_1
   - certifi=2025.10.5=pyhd8ed1ab_0
-  - cffi=2.0.0=py310h34a4b09_0
+  - cffi=1.17.1=py310h8deb56e_0
   - click=8.3.0=pyh707e725_0
   - cloudpickle=3.1.1=pyhd8ed1ab_0
   - colorama=0.4.6=pyhd8ed1ab_1
   - contourpy=1.3.2=py310h3788b33_0
   - cycler=0.12.1=pyhd8ed1ab_1
   - cytoolz=1.0.1=py310ha75aee5_0
   - dask-core=2025.3.0=pyhd8ed1ab_0
-  - dill=0.4.0=pyhd8ed1ab_0
-  - discretize=0.11.3=py310ha2bacc8_0
+  - discretize=0.11.3=py310hc563356_1
   - distributed=2025.3.0=pyhd8ed1ab_0
   - fasteners=0.19=pyhd8ed1ab_1
   - fonttools=4.60.1=py310h3406613_0
@@ -43,8 +41,6 @@ dependencies:
   - hyperframe=6.1.0=pyhd8ed1ab_0
   - icu=75.1=he02047a_0
   - importlib-metadata=8.7.0=pyhe01879c_1
-  - importlib_metadata=8.7.0=h40b2b14_1
-  - isort=6.1.0=pyhd8ed1ab_0
   - jinja2=3.1.6=pyhd8ed1ab_0
   - joblib=1.5.2=pyhd8ed1ab_0
   - keyutils=1.6.3=hb9d3cd8_0
@@ -54,28 +50,28 @@ dependencies:
   - ld_impl_linux-64=2.44=ha97dd6f_2
   - lerc=4.0.0=h0aef613_1
   - libaec=1.1.4=h3f801dc_0
-  - libblas=3.9.0=36_h5875eb1_mkl
+  - libblas=3.9.0=37_h5875eb1_mkl
   - libbrotlicommon=1.1.0=hb03c661_4
   - libbrotlidec=1.1.0=hb03c661_4
   - libbrotlienc=1.1.0=hb03c661_4
-  - libcblas=3.9.0=36_hfef963f_mkl
+  - libcblas=3.9.0=37_hfef963f_mkl
   - libcurl=8.14.1=h332b0f4_0
   - libdeflate=1.24=h86f0d12_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libedit=3.1.20250104=pl5321h7949ede_0
   - libev=4.33=hd590300_2
   - libexpat=2.7.1=hecca717_0
-  - libffi=3.4.6=h2dba641_1
+  - libffi=3.5.2=h9ec8514_0
   - libfreetype=2.14.1=ha770c72_0
   - libfreetype6=2.14.1=h73754d4_0
-  - libgcc=15.2.0=h767d61c_6
-  - libgcc-ng=15.2.0=h69a702a_6
-  - libgfortran=15.2.0=h69a702a_6
-  - libgfortran5=15.2.0=hcd61629_6
+  - libgcc=15.2.0=h767d61c_7
+  - libgcc-ng=15.2.0=h69a702a_7
+  - libgfortran=15.2.0=h69a702a_7
+  - libgfortran5=15.2.0=hcd61629_7
   - libhwloc=2.12.1=default_h7f8ec31_1002
   - libiconv=1.18=h3b78370_2
   - libjpeg-turbo=3.1.0=hb9d3cd8_0
-  - liblapack=3.9.0=36_h5e43f62_mkl
+  - liblapack=3.9.0=37_h5e43f62_mkl
   - liblzma=5.8.1=hb9d3cd8_2
   - libnghttp2=1.67.0=had1ee68_0
   - libnsl=2.0.1=hb9d3cd8_1
@@ -84,8 +80,8 @@ dependencies:
   - libspatialindex=2.0.0=he02047a_0
   - libsqlite=3.50.4=h0c1763c_0
   - libssh2=1.11.1=hcf80075_0
-  - libstdcxx=15.2.0=h8f9b012_6
-  - libstdcxx-ng=15.2.0=h4852527_6
+  - libstdcxx=15.2.0=h8f9b012_7
+  - libstdcxx-ng=15.2.0=h4852527_7
   - libtiff=4.7.1=h8261f1e_0
   - libuuid=2.41.2=he9a06e4_0
   - libwebp-base=1.6.0=hd42ef1d_0
@@ -94,14 +90,13 @@ dependencies:
   - libxml2=2.15.0=h26afc86_1
   - libxml2-16=2.15.0=ha9997c6_1
   - libzlib=1.3.1=hb9d3cd8_2
-  - llvm-openmp=21.1.2=h4922eb0_3
+  - llvm-openmp=21.1.3=h4922eb0_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.3=py310h3406613_0
   - matplotlib-base=3.8.4=py310hef631a5_2
-  - mccabe=0.7.0=pyhd8ed1ab_1
   - metis=5.1.0=hd0bcaf9_1007
   - mkl=2024.2.2=ha770c72_17
-  - msgpack-python=1.1.1=py310h03d9f68_1
+  - msgpack-python=1.1.2=py310h03d9f68_0
   - mumps-include=5.7.3=h82cca05_10
   - mumps-seq=5.7.3=h06cbf8f_10
   - munkres=1.1.4=pyhd8ed1ab_1
@@ -115,18 +110,16 @@ dependencies:
   - partd=1.4.2=pyhd8ed1ab_0
   - pillow=10.3.0=py310hebfe307_1
   - pip=25.2=pyh8b19718_0
-  - platformdirs=4.4.0=pyhcf101f3_0
   - psutil=7.1.0=py310h7c4b9e2_0
   - pthread-stubs=0.4=hb9d3cd8_1002
   - pycparser=2.22=pyh29332c3_1
-  - pydantic=2.11.10=pyh3cfb1c2_0
-  - pydantic-core=2.33.2=py310hbcd0ec0_0
+  - pydantic=2.12.1=pyh3cfb1c2_0
+  - pydantic-core=2.41.3=py310hd8f68c5_0
   - pydiso=0.1.2=py310h69a6472_0
-  - pylint=3.3.9=pyhcf101f3_0
   - pymatsolver=0.3.1=pyh48887ae_201
   - pyparsing=3.2.5=pyhcf101f3_0
   - pysocks=1.7.1=pyha55dd90_7
-  - python=3.10.18=hd6af730_0_cpython
+  - python=3.10.19=hd994cfb_1_cpython
   - python-dateutil=2.9.0.post0=pyhe01879c_2
   - python-mumps=0.0.3=py310h6410a28_0
   - python-tzdata=2025.2=pyhd8ed1ab_0
@@ -144,8 +137,6 @@ dependencies:
   - tblib=3.1.0=pyhd8ed1ab_0
   - threadpoolctl=3.6.0=pyhecae5ae_0
   - tk=8.6.13=noxft_hd72426e_102
-  - tomli=2.2.1=pyhe01879c_2
-  - tomlkit=0.13.3=pyha770c72_0
   - toolz=1.0.0=pyhd8ed1ab_1
   - tornado=6.5.2=py310h7c4b9e2_1
   - tqdm=4.67.1=pyhd8ed1ab_1
@@ -167,10 +158,10 @@ dependencies:
   - zstandard=0.25.0=py310h139afa4_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@13980469f5548c3dcbd2bd208b232bf02a2f68ca
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@e5a08e7bfed421e16b59c318ea430aec55a2c005
+    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@ed5f5cf8cd1a3ef9c3ec13140215d4b5d3da0a31
+    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@b7e7ecdb90fb6daa40c9d7348380542fd1131994
     - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@ed6918388d6fc4062f72e471e415a1a22cc15d0d
-    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@825b0b73fcc95b7b2c9629c19ea8861222adad7e
+    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@7564c0999208f9ff8f9e3733f5ffd22da9b333ee
 
 variables:
   KMP_WARNINGS: 0