DEVOPS-869: no need for jinja nor toml in tests

.pre-commit-config.yaml

@@ -12,18 +12,19 @@ ci:
 
 repos:
 -   repo: https://github.com/python-poetry/poetry
-    rev: 2.1.3
+    rev: 2.2.1
     hooks:
     -   id: poetry-check
+        args: [--no-plugins]
 -   repo: https://github.com/hadialqattan/pycln
-    rev: v2.5.0
+    rev: v2.6.0
     hooks:
     -   id: pycln
         args: [--config=pyproject.toml]
 -   repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.11.12
+    rev: v0.14.3
     hooks:
-    -   id: ruff
+    -   id: ruff-check
         args:
         -   --fix
         -   --exit-non-zero-on-fix
@@ -72,7 +73,7 @@ repos:
         exclude: (-lock\.ya?ml|\benvironments/.*\.ya?ml|\.ipynb|^THIRD_PARTY_SOFTWARE\.rst)$
         entry: codespell -I .codespellignore
 -   repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v5.0.0
+    rev: v6.0.0
     hooks:
     -   id: trailing-whitespace
         exclude: \.mdj$

environments/py-3.10-linux-64-dev.conda.lock.yml

@@ -1,13 +1,12 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: c8f7ae0bddeffc0ce95aebb250579b216dcf022feb26f8e2d841be6b05442f87
+# input_hash: c673a224b6a128d7a5be2ae3cc61985682147dba1ef082272e749eff0a34af2b
 
 channels:
   - conda-forge
   - nodefaults
 dependencies:
   - _openmp_mutex=4.5=5_kmp_llvm
-  - accessible-pygments=0.0.5=pyhd8ed1ab_1
   - alabaster=0.7.16=pyhd8ed1ab_0
   - annotated-types=0.7.0=pyhd8ed1ab_1
   - anyio=4.11.0=pyhcf101f3_0
@@ -36,15 +35,14 @@ dependencies:
   - cffi=2.0.0=py310he7384ee_1
   - charset-normalizer=3.4.4=pyhd8ed1ab_0
   - click=8.3.0=pyh707e725_0
-  - cloudpickle=3.1.1=pyhd8ed1ab_0
+  - cloudpickle=3.1.2=pyhd8ed1ab_0
   - colorama=0.4.6=pyhd8ed1ab_1
   - comm=0.2.3=pyhe01879c_0
   - contourpy=1.3.2=py310h3788b33_0
   - coverage=7.11.0=py310h3406613_0
   - cycler=0.12.1=pyhd8ed1ab_1
   - cytoolz=1.1.0=py310h7c4b9e2_1
   - dask-core=2025.3.0=pyhd8ed1ab_0
-  - dataclasses=0.8=pyhc8e2a94_3
   - debugpy=1.8.17=py310h25320af_0
   - decorator=5.2.1=pyhd8ed1ab_0
   - defusedxml=0.7.1=pyhd8ed1ab_0
@@ -60,7 +58,6 @@ dependencies:
   - freetype=2.14.1=ha770c72_0
   - fsspec=2025.10.0=pyhd8ed1ab_0
   - geoana=0.7.2=py310hc563356_1
-  - greenlet=3.2.4=py310hea6c23e_1
   - h11=0.16.0=pyhd8ed1ab_0
   - h2=4.3.0=pyhcf101f3_0
   - h5py=3.15.1=nompi_py310h4aa865e_100
@@ -69,10 +66,10 @@ dependencies:
   - httpcore=1.0.9=pyh29332c3_0
   - httpx=0.28.1=pyhd8ed1ab_0
   - hyperframe=6.1.0=pyhd8ed1ab_0
+  - icu=75.1=he02047a_0
   - idna=3.11=pyhd8ed1ab_0
   - imagesize=1.4.1=pyhd8ed1ab_0
   - importlib-metadata=8.7.0=pyhe01879c_1
-  - importlib_metadata=8.7.0=h40b2b14_1
   - iniconfig=2.3.0=pyhd8ed1ab_0
   - ipykernel=7.1.0=pyha191276_0
   - ipython=8.37.0=pyh8f84b5b_0
@@ -88,8 +85,7 @@ dependencies:
   - jsonschema=4.25.1=pyhe01879c_0
   - jsonschema-specifications=2025.9.1=pyhcf101f3_0
   - jsonschema-with-format-nongpl=4.25.1=he01879c_0
-  - jupyter-book=1.0.3=pyhd8ed1ab_1
-  - jupyter-cache=1.0.1=pyhff2d567_0
+  - jupyter-book=2.0.2=pyhcf101f3_0
   - jupyter-lsp=2.3.0=pyhcf101f3_0
   - jupyter_client=8.6.3=pyhd8ed1ab_1
   - jupyter_core=5.9.1=pyhc90fa1f_0
@@ -105,7 +101,6 @@ dependencies:
   - kiwisolver=1.4.9=py310haaf941d_1
   - krb5=1.21.3=h659f571_0
   - lark=1.3.1=pyhd8ed1ab_0
-  - latexcodec=2.0.1=pyh9f0ad1d_0
   - lcms2=2.17=h717163a_0
   - ld_impl_linux-64=2.44=h1aa0949_4
   - lerc=4.0.0=h0aef613_1
@@ -116,7 +111,7 @@ dependencies:
   - libbrotlienc=1.2.0=h02bd7ab_0
   - libcblas=3.9.0=37_hfef963f_mkl
   - libcurl=8.16.0=h4e3cde8_0
-  - libdeflate=1.24=h86f0d12_0
+  - libdeflate=1.25=h17f619e_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libedit=3.1.20250104=pl5321h7949ede_0
   - libev=4.33=hd590300_2
@@ -130,7 +125,7 @@ dependencies:
   - libgfortran5=15.2.0=hcd61629_7
   - libhwloc=2.12.1=default_h7f8ec31_1002
   - libiconv=1.18=h3b78370_2
-  - libjpeg-turbo=3.1.0=hb9d3cd8_0
+  - libjpeg-turbo=3.1.2=hb03c661_0
   - liblapack=3.9.0=37_h5e43f62_mkl
   - liblzma=5.8.1=hb9d3cd8_2
   - libnghttp2=1.67.0=had1ee68_0
@@ -143,18 +138,18 @@ dependencies:
   - libssh2=1.11.1=hcf80075_0
   - libstdcxx=15.2.0=h8f9b012_7
   - libstdcxx-ng=15.2.0=h4852527_7
-  - libtiff=4.7.1=h8261f1e_0
+  - libtiff=4.7.1=h9d88235_1
   - libuuid=2.41.2=he9a06e4_0
+  - libuv=1.51.0=hb03c661_1
   - libwebp-base=1.6.0=hd42ef1d_0
   - libxcb=1.17.0=h8a09558_0
   - libxcrypt=4.4.36=hd590300_1
-  - libxml2=2.15.1=h031cc0b_0
-  - libxml2-16=2.15.1=hf2a90c1_0
+  - libxml2=2.15.1=h26afc86_0
+  - libxml2-16=2.15.1=ha9997c6_0
   - libzlib=1.3.1=hb9d3cd8_2
-  - linkify-it-py=2.0.3=pyhd8ed1ab_1
   - llvm-openmp=21.1.4=h4922eb0_0
   - locket=1.0.0=pyhd8ed1ab_0
-  - markdown-it-py=2.2.0=pyhd8ed1ab_0
+  - markdown-it-py=4.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.3=py310h3406613_0
   - matplotlib-base=3.8.4=py310hef631a5_2
   - matplotlib-inline=0.2.1=pyhd8ed1ab_0
@@ -168,15 +163,14 @@ dependencies:
   - mumps-include=5.7.3=h82cca05_10
   - mumps-seq=5.7.3=h06cbf8f_10
   - munkres=1.1.4=pyhd8ed1ab_1
-  - myst-nb=1.3.0=pyhe01879c_0
-  - myst-parser=1.0.0=pyhd8ed1ab_0
   - nbclient=0.10.2=pyhd8ed1ab_0
   - nbconvert=7.16.6=hc388f54_1
   - nbconvert-core=7.16.6=pyhcf101f3_1
   - nbconvert-pandoc=7.16.6=h7d6f222_1
   - nbformat=5.10.4=pyhd8ed1ab_1
   - ncurses=6.5=h2d0b736_3
   - nest-asyncio=1.6.0=pyhd8ed1ab_1
+  - nodejs=22.6.0=hc19f0b3_1
   - notebook=7.4.7=pyhd8ed1ab_0
   - notebook-shim=0.2.4=pyhd8ed1ab_1
   - numcodecs=0.13.1=py310h5eaa309_0
@@ -198,16 +192,13 @@ dependencies:
   - pluggy=1.6.0=pyhd8ed1ab_0
   - prometheus_client=0.23.1=pyhd8ed1ab_0
   - prompt-toolkit=3.0.52=pyha770c72_0
-  - psutil=7.1.2=py310h139afa4_1
+  - psutil=7.1.3=py310h139afa4_0
   - pthread-stubs=0.4=hb9d3cd8_1002
   - ptyprocess=0.7.0=pyhd8ed1ab_1
   - pure_eval=0.2.3=pyhd8ed1ab_1
-  - pybtex=0.25.1=pyhd8ed1ab_0
-  - pybtex-docutils=1.0.3=py310hff52083_3
   - pycparser=2.22=pyh29332c3_1
   - pydantic=2.12.3=pyh3cfb1c2_0
   - pydantic-core=2.41.4=py310hd8f68c5_0
-  - pydata-sphinx-theme=0.15.4=pyhd8ed1ab_0
   - pydiso=0.1.2=py310h4b187eb_1
   - pygments=2.19.2=pyhd8ed1ab_0
   - pylint=4.0.2=pyhcf101f3_0
@@ -245,25 +236,13 @@ dependencies:
   - sortedcontainers=2.4.0=pyhd8ed1ab_1
   - soupsieve=2.8=pyhd8ed1ab_0
   - sphinx=5.3.0=pyhd8ed1ab_0
-  - sphinx-book-theme=1.1.3=pyhd8ed1ab_1
-  - sphinx-comments=0.0.3=pyhd8ed1ab_1
-  - sphinx-copybutton=0.5.2=pyhd8ed1ab_1
-  - sphinx-design=0.6.1=pyhd8ed1ab_0
-  - sphinx-external-toc=1.0.1=pyhd8ed1ab_1
-  - sphinx-jupyterbook-latex=1.0.0=pyhd8ed1ab_1
-  - sphinx-multitoc-numbering=0.1.3=pyhd8ed1ab_1
-  - sphinx-thebe=0.3.1=pyhd8ed1ab_1
-  - sphinx-togglebutton=0.3.2=pyhd8ed1ab_0
   - sphinxcontrib-applehelp=2.0.0=pyhd8ed1ab_1
-  - sphinxcontrib-bibtex=2.5.0=pyhd8ed1ab_0
   - sphinxcontrib-devhelp=2.0.0=pyhd8ed1ab_1
   - sphinxcontrib-htmlhelp=2.1.0=pyhd8ed1ab_1
   - sphinxcontrib-jsmath=1.0.1=pyhd8ed1ab_1
   - sphinxcontrib-qthelp=2.0.0=pyhd8ed1ab_1
   - sphinxcontrib-serializinghtml=1.1.10=pyhd8ed1ab_1
-  - sqlalchemy=2.0.44=py310h7c4b9e2_0
   - stack_data=0.6.3=pyhd8ed1ab_1
-  - tabulate=0.9.0=pyhd8ed1ab_2
   - tbb=2021.13.0=hb60516a_3
   - tblib=3.1.0=pyhd8ed1ab_0
   - terminado=0.18.1=pyh0d859eb_0
@@ -282,12 +261,11 @@ dependencies:
   - typing_extensions=4.15.0=pyhcf101f3_0
   - typing_utils=0.1.0=pyhd8ed1ab_1
   - tzdata=2025b=h78e105d_0
-  - uc-micro-py=1.0.3=pyhd8ed1ab_1
   - unicodedata2=16.0.0=py310h7c4b9e2_1
   - uri-template=1.3.0=pyhd8ed1ab_1
   - urllib3=2.5.0=pyhd8ed1ab_0
   - wcwidth=0.2.14=pyhd8ed1ab_0
-  - webcolors=24.11.1=pyhd8ed1ab_0
+  - webcolors=25.10.0=pyhd8ed1ab_0
   - webencodings=0.5.1=pyhd8ed1ab_3
   - websocket-client=1.9.0=pyhd8ed1ab_0
   - wheel=0.45.1=pyhd8ed1ab_1
@@ -300,12 +278,13 @@ dependencies:
   - zeromq=4.3.5=h387f397_9
   - zict=3.0.0=pyhd8ed1ab_1
   - zipp=3.23.0=pyhd8ed1ab_0
+  - zlib=1.3.1=hb9d3cd8_2
   - zstandard=0.25.0=py310h139afa4_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@ed5f5cf8cd1a3ef9c3ec13140215d4b5d3da0a31
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@61191f47410bbbb072e32cb29b37b3bb2370722a
-    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@b3352058d585613d34ff3042675a79a3b3e4bfbd
+    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@b0b61f355dd536bbb3a77b0b4c2853e169c1e8c3
+    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166
     - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@489775b595d5abce81d49b52bfefcecc3181c5c5
 
 variables:

environments/py-3.10-linux-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: c8f7ae0bddeffc0ce95aebb250579b216dcf022feb26f8e2d841be6b05442f87
+# input_hash: c673a224b6a128d7a5be2ae3cc61985682147dba1ef082272e749eff0a34af2b
 
 channels:
   - conda-forge
@@ -21,7 +21,7 @@ dependencies:
   - certifi=2025.10.5=pyhd8ed1ab_0
   - cffi=2.0.0=py310he7384ee_1
   - click=8.3.0=pyh707e725_0
-  - cloudpickle=3.1.1=pyhd8ed1ab_0
+  - cloudpickle=3.1.2=pyhd8ed1ab_0
   - colorama=0.4.6=pyhd8ed1ab_1
   - contourpy=1.3.2=py310h3788b33_0
   - cycler=0.12.1=pyhd8ed1ab_1
@@ -39,6 +39,7 @@ dependencies:
   - hdf5=1.14.6=nompi_h6e4c0c1_103
   - hpack=4.1.0=pyhd8ed1ab_0
   - hyperframe=6.1.0=pyhd8ed1ab_0
+  - icu=75.1=he02047a_0
   - importlib-metadata=8.7.0=pyhe01879c_1
   - jinja2=3.1.6=pyhd8ed1ab_0
   - joblib=1.5.2=pyhd8ed1ab_0
@@ -55,7 +56,7 @@ dependencies:
   - libbrotlienc=1.2.0=h02bd7ab_0
   - libcblas=3.9.0=37_hfef963f_mkl
   - libcurl=8.16.0=h4e3cde8_0
-  - libdeflate=1.24=h86f0d12_0
+  - libdeflate=1.25=h17f619e_0
   - libdlf=0.3.0=pyhd8ed1ab_1
   - libedit=3.1.20250104=pl5321h7949ede_0
   - libev=4.33=hd590300_2
@@ -69,7 +70,7 @@ dependencies:
   - libgfortran5=15.2.0=hcd61629_7
   - libhwloc=2.12.1=default_h7f8ec31_1002
   - libiconv=1.18=h3b78370_2
-  - libjpeg-turbo=3.1.0=hb9d3cd8_0
+  - libjpeg-turbo=3.1.2=hb03c661_0
   - liblapack=3.9.0=37_h5e43f62_mkl
   - liblzma=5.8.1=hb9d3cd8_2
   - libnghttp2=1.67.0=had1ee68_0
@@ -81,13 +82,13 @@ dependencies:
   - libssh2=1.11.1=hcf80075_0
   - libstdcxx=15.2.0=h8f9b012_7
   - libstdcxx-ng=15.2.0=h4852527_7
-  - libtiff=4.7.1=h8261f1e_0
+  - libtiff=4.7.1=h9d88235_1
   - libuuid=2.41.2=he9a06e4_0
   - libwebp-base=1.6.0=hd42ef1d_0
   - libxcb=1.17.0=h8a09558_0
   - libxcrypt=4.4.36=hd590300_1
-  - libxml2=2.15.1=h031cc0b_0
-  - libxml2-16=2.15.1=hf2a90c1_0
+  - libxml2=2.15.1=h26afc86_0
+  - libxml2-16=2.15.1=ha9997c6_0
   - libzlib=1.3.1=hb9d3cd8_2
   - llvm-openmp=21.1.4=h4922eb0_0
   - locket=1.0.0=pyhd8ed1ab_0
@@ -109,7 +110,7 @@ dependencies:
   - partd=1.4.2=pyhd8ed1ab_0
   - pillow=10.3.0=py310hebfe307_1
   - pip=25.2=pyh8b19718_0
-  - psutil=7.1.2=py310h139afa4_1
+  - psutil=7.1.3=py310h139afa4_0
   - pthread-stubs=0.4=hb9d3cd8_1002
   - pycparser=2.22=pyh29332c3_1
   - pydantic=2.12.3=pyh3cfb1c2_0
@@ -157,9 +158,9 @@ dependencies:
   - zstandard=0.25.0=py310h139afa4_0
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@ed5f5cf8cd1a3ef9c3ec13140215d4b5d3da0a31
-    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@61191f47410bbbb072e32cb29b37b3bb2370722a
-    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@b3352058d585613d34ff3042675a79a3b3e4bfbd
+    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@b0b61f355dd536bbb3a77b0b4c2853e169c1e8c3
+    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a9f5721079c097b1fa484ff8424146c6cd1a8c0c
+    - grid-apps @ git+https://github.com/MiraGeoscience/grid-apps.git@d6a42611003c184354e1367de41a88783b928166
     - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@489775b595d5abce81d49b52bfefcecc3181c5c5
 
 variables: