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corrected number of rows in table. #2

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corrected number of rows in table. #2

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23 changes: 15 additions & 8 deletions SCOTUS_SMR_plot.R
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Original file line number Diff line number Diff line change
Expand Up @@ -7,8 +7,10 @@
##########################################################

## Read in the SMRs
smr.data <- read.table("smr.txt",header=TRUE,sep=" ")

smr.data.all <- read.table("smr.txt",header=TRUE,sep=" ")
summary(smr.data.all)
smr.data <- smr.data.all[-23,]
summary(smr.data)
## Set graphical parameters (margins)
par(mar = c(6, 4, 1, 1))

Expand Down Expand Up @@ -40,15 +42,15 @@ for (i in 1:22) {
######################################################################################

## Create the SMR plot backbone
plot(seq(1,23,1),smr.data$smr,pch=22,col="black",bg="black",xaxt="n",yaxt="n",
plot(seq(1,23,1),smr.data.all$smr,pch=22,col="black",bg="black",xaxt="n",yaxt="n",
ylim=c(0,4),xlab="",ylab="",cex=1.5)
points(23,smr.data$smr[23],pch=22,col="red",bg="red",cex=1.5)
points(23,smr.data.all$smr[23],pch=22,col="red",bg="red",cex=1.5)

## Add axes and tick-mark labels
axis(1,at=1:23,labels=FALSE)
axis(2,at=seq(0,4,0.5), labels=FALSE)
text(1:22,par("usr")[3]-0.25,srt=45,adj=1,labels=smr.data$period[1:22],xpd=TRUE,cex=0.9)
text(23,par("usr")[3]-0.25,srt=45,adj=1,labels=smr.data$period[23],xpd=TRUE,cex=0.9,col="red")
text(1:22,par("usr")[3]-0.25,srt=45,adj=1,labels=smr.data.all$period[1:22],xpd=TRUE,cex=0.9)
text(23,par("usr")[3]-0.25,srt=45,adj=1,labels=smr.data.all$period[23],xpd=TRUE,cex=0.9,col="red")
axis(2,las=1,at=c(0,0.5,1,1.5,2,2.5,3,3.5,4),labels=c("0.0","0.5","1.0","1.5","2.0","2.5","3.0","3.5","4.0"))

## Add Axis labels
Expand All @@ -60,6 +62,11 @@ for (i in 1:22) {

## Put in all the confidence bands
for (i in 1:22) {
segments(i,smr.data$lci[i],i,smr.data$uci[i],col="black")
segments(i,smr.data.all$lci[i],i,smr.data.all$uci[i],col="black")
}
segments(23,smr.data$lci[23],23,smr.data$uci[23],col="red")
segments(23,smr.data.all$lci[23],23,smr.data.all$uci[23],col="red")