To create a new version
- create python venv
- fill
drug_combs/input_data/aact_credentials.jsonwith your credentials for AACT -
pip install -r requirements
-
cd drug_combs
- Create a new version by running the creation script
./create_version.sh
- Follow the progress-bars, and install scispacy's model if missing
Note, there are plenty of caches used in this system, therefore the first run would be longer.