Github actions: fix OpenMPI network issue when running make ptest#218
Merged
wkliao merged 1 commit intoParallel-NetCDF:masterfrom Jan 30, 2026
Merged
Github actions: fix OpenMPI network issue when running make ptest#218wkliao merged 1 commit intoParallel-NetCDF:masterfrom
wkliao merged 1 commit intoParallel-NetCDF:masterfrom
Conversation
* Specify the loopback interface: Explicitly instruct Open MPI to use
the local loopback interface (lo0) for communications by setting the
OMPI_MCA_btl_tcp_if_include environment variable. In your terminal
(e.g., zsh or bash), run the following command:
+ export OMPI_MCA_btl_tcp_if_include=lo0
Then, try running your MPI program again.
* Set a short temporary directory path: In some cases, long file names in
the default temporary directory can cause issues on macOS. Setting the
TMPDIR environment variable to a shorter path like /tmp can help:
+ export TMPDIR=/tmp
After setting this, try running your MPI program.
* Error message:
[iad20-eo1205-ccaaba69-b68d-4eae-afa9-dee869e099ae-2690965F61F0.local:90667]
ptl_tool: problems getting address for index 0 (kernel index -1)
--------------------------------------------------------------------------
You requested support for tool connections, but no available
FAIL: nprocs=./pnetcdf-permute ---- pnetcdf-permute
interfaces were found after applying any include or exclude directives:
Include: NULL
Exclude: NULL
Available:
Please adjust your include or exclude to allow selection of an
available interface.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Github CI failed sporadically when running "make ptest" using OpenMPI on Mac OS with the below error message.
Potential fixes are:
Specify the loopback interface: Explicitly instruct Open MPI to use the local loopback interface (lo0) for communications by setting the OMPI_MCA_btl_tcp_if_include environment variable. In your terminal (e.g., zsh or bash), run the following command:
Set a short temporary directory path: In some cases, long file names in the default temporary directory can cause issues on macOS. Setting the TMPDIR environment variable to a shorter path like /tmp can help: