Draft For review#4
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…reate-with-unit,-route-and-ddd Razekmh/1 merge omop drug lookup create with unit, route and ddd
…e-DDD Razekmh/3 add a method to query the ddd
…ate-DDD Razekmh/5 build a method to calculate ddd
This calcualtion works fine now but the code is not very efficient. I will need to check this later.
currently the drug_strengths table returns all the ingredients associated with a drug. This is a problem because not all ingredients are "antibiotics" and we need to filter the list to only include antibiotics.
Razekmh/7 add compute ddd func
- the user will need to specify the type of id they are using - durg id will be the default - I still need to fix the problem with finding the correct active ingredient id for a drug id
Razekmh/7 add compute ddd func
andysouth
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andysouth
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Hi @razekmh this looks really great ! Given how much work there is involved and the uncertainty in where to get the ddd data from I think it would be good to put this in a separate package. I can help to create a new package & repository. We would need to decide what to call the package. Does creating a new package seem like a good idea to you @stefpiatek ?
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I do not have much experience in building packages in R but would be happy to learn. The code depends on the a few methods from omopcept and if we were to split it, I think I will need to either copy them or build similar ones. Any advice on the architecture is appreciated too. |
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I can take you through package building - after I've reminded myself ;-) You've done the hard bits. We can get it to rely on omopcept so no need to copy functions :-) |
add export to csv and date filter
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