Add Biopython#3
Conversation
|
bot: build repo:eessi.io-2025.06-software instance:surf-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
bot: build repo:eessi.io-2025.06-software instance:surf-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
bot:cancel job:22637713 |
|
bot: build repo:eessi.io-2025.06-software instance:surf-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
bot: build repo:eessi.io-2025.06-software instance:surf-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
bot: build repo:software.surf.nl-2025 instance:surf-hpcv-bot for:arch=x86_64/amd/zen2 |
|
Both jobs are hanging, because CVMFS isn't cleaning up. And this is keeping the job running, even though the container run has finished. |
|
I'll kill it manually... bot:cancel jobid:22639852 |
|
bot:cancel jobid:22640012 |
|
bot: build repo:software.surf.nl-2025 instance:surf-hpcv-bot for:arch=x86_64/amd/zen2 |
|
bot:show_config |
|
Instance
|
|
bot:show_config |
|
Instance
|
|
bot: build repo:software.surf.nl-2025 instance:surf-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
Weird... I don't understand why it would matter what repo I'm targetting for pulling the container - that should always work? |
|
Let's see if this was just a hickup: bot: build repo:software.surf.nl-2025 instance:surf-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
New job on instance
|
|
bot: build repo:software.surf.nl-2025 instance:surf-hpcv-bot for:arch=x86_64/amd/zen2 |
|
The deploy seems to have worked (see #3 (comment) with the succesful upload message), though I don't really know what to expect on the bucket side: |
|
Ignoring the failing test step for now, I've created a script to handle automated ingestion. It fakes checking the signature (for now): With that, and my S3 credentials set up at the Stratum 0: Note that rerunning prints: On the stratum 0: On the client: Then: Not bad at all! :) |
|
bot: build repo:software.casparl.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
bot:show_config |
|
Instance
|
|
Instance
|
|
bot: build repo:software.casparl.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
bot: build repo:software.caspar.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
1 similar comment
|
bot: build repo:software.caspar.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
Restarted the bot to know about the new software.caspar.nl-2025 repo |
|
bot: build repo:software.caspar.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
Fixed repos config |
|
bot: build repo:software.caspar.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
bot: build repo:software.caspar.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
Before, it would still build from bot: build repo:software.caspar.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
Check if error is now more clear: bot: build repo:software.caspar.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
bot: build repo:software.caspar.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
|
bot: build repo:software.caspar.nl-2025 instance:caspar-hpcv-bot for:arch=x86_64/amd/zen2 |
|
New job on instance
|
No description provided.