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Artic 1.10.1#1685

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RaheelSyedAhmed wants to merge 3 commits into
StaPH-B:masterfrom
RaheelSyedAhmed:artic-1.10.1
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Artic 1.10.1#1685
RaheelSyedAhmed wants to merge 3 commits into
StaPH-B:masterfrom
RaheelSyedAhmed:artic-1.10.1

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@RaheelSyedAhmed
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Pull Request (PR) checklist:

  • Include a description of what is in this pull request in this message.
  • The dockerfile successfully builds to a test target for the user creating the PR. (i.e. docker build --tag samtools:1.15test --target test docker-builds/build-files/samtools/1.15 )
  • Directory structure as name of the tool in lower case with special characters removed with a subdirectory of the version number in build-files (i.e. docker-builds/build-files/spades/3.12.0/Dockerfile)
    • (optional) All test files are located in same directory as the Dockerfile (i.e. build-files/shigatyper/2.0.1/test.sh)
  • Create a simple container-specific README.md in the same directory as the Dockerfile (i.e. docker-builds/build-files/spades/3.12.0/README.md)
    • If this README is longer than 30 lines, there is an explanation as to why more detail was needed
  • Dockerfile includes the recommended LABELS
  • Main README.md has been updated to include the tool and/or version of the dockerfile(s) in this PR
  • Program_Licenses.md contains the tool(s) used in this PR and has been updated for any missing

This PR includes an update to the Dockerfile to install version 1.10.1 of Artic. The program license file and main README.md have been checked, and the version 1.10.1 entry for Artic has been added to the versions dropdown. The program README.md has been updated with the installed packages' versions and included models from /opt/conda/envs/artic/bin/models, which does extend it past 30 lines.

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