Search results

Cellpose v4 compatibility

Status: Open.

#32 In SydneyBioX/BIDCell;

· simonmfr opened on Jul 28, 2025

[BIDCell] morphology_focus_0000.ome.tif

Status: Open.

#31 In SydneyBioX/BIDCell;

· jpark27 opened on Jul 23, 2025

KeyError related to UnassignedCodeword and DeprecatedCodeword

Status: Open.

#30 In SydneyBioX/BIDCell;

· mattrkearney opened on Jun 2, 2025

Official docker and singularity images

Status: Open.

#29 In SydneyBioX/BIDCell;

· an-altosian opened on Apr 13, 2025

how to get a morphology_mip.ome.tif

Status: Open.

#28 In SydneyBioX/BIDCell;

· Liyongheng-03 opened on Apr 10, 2025

ConnectionResetError: [Errno 104] Connection reset by peer

Status: Open.

#27 In SydneyBioX/BIDCell;

· Nakyung210 opened on Jan 30, 2025

Suggestion: add the choice of H&E stains to nuclei segment instead of DAPI stains

Status: Open.

#25 In SydneyBioX/BIDCell;

· falsetry1514 opened on Sep 10, 2024

Details of datasets

Status: Open.

#24 In SydneyBioX/BIDCell;

· raman91 opened on Sep 4, 2024

Error Encountered During Training

Status: Open.

#23 In SydneyBioX/BIDCell;

· Beiusxzw opened on Aug 23, 2024

Can I also use this method if I don't have reference

Status: Open.

#22 In SydneyBioX/BIDCell;

· Yifan-debug opened on Aug 20, 2024

Suggestion: Use of predefined cell localisation instead of DAPI image

Status: Open.

#21 In SydneyBioX/BIDCell;

· GBeattie opened on Aug 6, 2024

specify the out put folder to save the BIDCell results

Status: Open.

#19 In SydneyBioX/BIDCell;

· z5ouyang opened on Jul 12, 2024