Home

Welcome to the EasyFuse wiki!

EasyFuse is a pipeline to detect fusion transcripts from RNA-seq data with high accuracy. EasyFuse uses five fusion gene detection tools, STAR-Fusion, InFusion, MapSplice2, Fusioncatcher, and SoapFuse along with powerful read filtering, stringent re-quantification of supporting reads, and machine learning for highly accurate prediction.

Publication: Weber D, Ibn-Salem J, Sorn P, et al. Nat Biotechnol. 2022

We recommend using EasyFuse with Docker or Singularity. For further information, including running EasyFuse and an output format description, please see our readme.