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Van Andel Research Institute

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  1. s3vs s3vs Public

    Demo viewer for Aperio SVS images from Amazon S3

    JavaScript 14 6

  2. slinky slinky Public

    Putting the fun into LINCS analysis

    R 7 2

  3. lambdaR lambdaR Public

    Bringing R as runtime to AWS Lambda

    6

  4. intent intent Public

    reformat inDrop fastqs so they look like 10X genomics fastqs

    C++ 5

  5. bifurcatoR bifurcatoR Public

    bifurcatoR package

    R 5 7

  6. pbsPretty pbsPretty Public

    colorful, descriptive alternives to pbsnodes and qstat

    Perl 3 1

Repositories

Showing 10 of 83 repositories
  • bifurcatoR Public

    bifurcatoR package

    VanAndelInstitute/bifurcatoR’s past year of commit activity
    R 5 GPL-2.0 7 0 2 Updated Feb 25, 2026
  • SignalFinder-Extension Public

    The SignalFinder Qupath extension implements the segment and fit SignalFinder algorithm in Qupath using cell measurements instead of a sliding window analysis. This results in a vastly faster and more reliable analysis.

    VanAndelInstitute/SignalFinder-Extension’s past year of commit activity
    0 0 0 0 Updated Feb 13, 2026
  • VAIDocker Public

    RHEL derivative containers for user admin on compute nodes

    VanAndelInstitute/VAIDocker’s past year of commit activity
    Shell 3 GPL-2.0 0 2 0 Updated Feb 12, 2026
  • oodRstudio Public Forked from stanford-rc/sh_ood-apps

    Open OnDemand apps, rstudio

    VanAndelInstitute/oodRstudio’s past year of commit activity
    HTML 0 GPL-3.0 15 0 0 Updated Feb 5, 2026
  • InSpec_Profiles Public

    Chef InSpec profiles for reusable tests against compliance baselines.

    VanAndelInstitute/InSpec_Profiles’s past year of commit activity
    Ruby 0 0 0 0 Updated Oct 14, 2025
  • influxdb_storage Public

    ingest storage data into influx

    VanAndelInstitute/influxdb_storage’s past year of commit activity
    Python 0 0 0 0 Updated Aug 21, 2025
  • slurmpretty Public

    slurmPretty

    VanAndelInstitute/slurmpretty’s past year of commit activity
    Perl 0 1 0 0 Updated Aug 20, 2025
  • aws-restore Public

    awsRestore is a python script that runs on the command line for restoring entire folders and subfolders stored in AWS Glacier Deep Archive.

    VanAndelInstitute/aws-restore’s past year of commit activity
    Python 1 0 0 0 Updated Jun 6, 2025
  • genomicsCoreFileMgmt Public

    tools to manage the VAI genomics core file lifecycle

    VanAndelInstitute/genomicsCoreFileMgmt’s past year of commit activity
    Perl 1 0 0 0 Updated May 28, 2025
  • reduced-host-information Public

    Reducing the amount of values produced from the original host-information.py file. This repository is being made to separate having a simpler output from a full output

    VanAndelInstitute/reduced-host-information’s past year of commit activity
    Python 0 0 0 0 Updated Apr 22, 2025
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