cell-gnn

Graph neural networks for cell simulations

Setup

Run the following line from the terminal to create a new environment cell-gnn:

conda env create -f environment.yaml

Activate the environment:

conda activate cell-gnn

Install the package by executing the following command from the root of this directory:

pip install -e .

Then, you should be able to import all the modules from the package in python:

from cell_gnn import *